Gene Htur_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_3454 
Symbol 
ID8744074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand+ 
Start bp3557500 
End bp3558075 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content64% 
IMG OID646514035 
ProductDNA-directed RNA polymerase 
Protein accessionYP_003404989 
Protein GI284166710 
COG category[K] Transcription 
COG ID[COG1095] DNA-directed RNA polymerase, subunit E' 
TIGRFAM ID[TIGR00448] DNA-directed RNA polymerase (rpoE), archaeal and eukaryotic form 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAAAC GGGTCAGACT GAAAGACACG GTAGAAGTAC CGCCGGAGGA GCTCGGCGAC 
GTCTCGCCGG ACCTCGTGAA GCGACTGCTA CAGGACAAAC TCGAGGGGCG CATGGACGAG 
GAGGTCGGTA GCGTCGTCTC GGTTACCGAG GTTCACGACA TCGGCGAGGG GACCGTCCTC 
CCGAACCGAC CGGGCGTCTA CTACGAGGCC GAGTTCGACG CGGTCACCTT CGATCCGCAG 
ATGCAGGAAG TCGTCGACGG CACCGTCGTC GAAGTCGTCG AGTTCGGCGC CTTCGTCGGC 
ATCGGCCCGG TCGACGGCCT GCTGCACGTC TCGCAGATCA GCGACGAGTA CCTCGCCTTC 
GACGGTGAGA ATCAGCGACT CTCCTCGAAC GAGTCCGACC GCGCACTCGG CGTCGACGAC 
GCCGTCCGCG CACGGATCGT CACCAAGAGT ATCGACGAGC GCAACCCTCG AGACTCGAAG 
ATCGGCCTCA CGGCCAAACA GCCCGGCCTG GGCAAACACG GCTGGCTCGA GGAGGAACAC 
GAGAAACGCG AAGCGACGAC GGCCGAGGGT GAGTAA
 
Protein sequence
MYKRVRLKDT VEVPPEELGD VSPDLVKRLL QDKLEGRMDE EVGSVVSVTE VHDIGEGTVL 
PNRPGVYYEA EFDAVTFDPQ MQEVVDGTVV EVVEFGAFVG IGPVDGLLHV SQISDEYLAF 
DGENQRLSSN ESDRALGVDD AVRARIVTKS IDERNPRDSK IGLTAKQPGL GKHGWLEEEH 
EKREATTAEG E