| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_3319 |
|---|
| Symbol | |
|---|
| ID | 8743939 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | - |
|---|
| Start bp | 3418327 |
|---|
| End bp | 3421113 |
|---|
| Gene Length | 2787 bp |
|---|
| Protein Length | 928 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646513902 |
|---|
| Product | valyl-tRNA synthetase |
|---|
| Protein accession | YP_003404856 |
|---|
| Protein GI | 284166577 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0525] Valyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00422] valyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACGG ACGCGCCCGA ATCGGAGCCG GAGAGCGATC CCGCTGATAG CGAGCCGACC
CTCGAGGGCG GTTACGATCC CGAAGCGGTC GAGGATCGCT GGCAGCGGCG CTGGATCGAC
GCGGACGTCT ACGCCTACGA GAGCGACGCC GAGCGCGATC CCAACACGGT CTACGCGATC
GACACGCCGC CGCCGACGGT CTCGGGCAGC CTGCACATGG GCCACCTCTA CGGCTCGACC
CTACAGGACT TCGCCGCGCG ATACCAGCGG ATGGCCGACG GCGACGTGCT CTTCCCCTTC
GGCTACGACG ACAATGGGAT CGCCAGCGAG CGACTGACCG AGTCGGAACT GGACATCCGC
CACCAGGACT ACGAGCGCCG CGAGTTCCAG GAGCTCTGCC GCGAGGTCTG TCAGGAGTAC
GAGGCCGAGT TCACGGAGAA GATGCAGGAT CTCGGCACCT CGATCGACTG GAATAACACC
TACAAGACGA TCGAACCTCG CGTCCAGCGG GTCTCACAGC TCTCCTTCCT CGATCTCTAC
GAGAAGGGAC GGGAGTATCG CAAGAAGGCG CCCGCGATCT GGTGTCCCGA CTGCGAGACG
GCCATCTCGC AGGTCGAGAT GGAAGACGAC GAGCGCGGCT CGCACTTCAA CGACATCGCG
TTCGACGTGG CAAGCGACGG TGCGGACCGC GAGGAGTTCG TCATCTCCAC GACGCGACCG
GAACTCATCC CCGCCTGCGT CTCCGTCTTC GTCCACCCCG ACGACGAGGA GAACCAGGAT
CTGGTCGGCG AGACCGCCCG CGTCCCGATC TTCGAGCAGG AGGTGCCGAT CATCGAGGAC
GAGCGCGTCG ACATGGAGAA GGGCAGCGGC GTCGTGATGT GCTGTACCTT CGGCGACCAG
AACGACATCG AGTGGTACCA GGCCCACGAC CTGCCGCTGC GCGTGGCCAT CGACGAGTCC
GCGACGATGA CCGACCTCGC CGGCGACTAC GAGGGAATGT CGACTGAGGA GGCCCGCGAG
GCCATCGTCG AAGACCTCGA GGACGAGGGG TACCTGCGCG ACCGCTGGGA GATCTCCCAC
GCGGTGCAGG TCCACGAACG CTGTGACACC GCCGTCGAGT ACCGCGTCTC CAAGCAGTGG
TACGTCGAAA TTCTGGACCA CAAGGAGGAG TACCTCGAGG CCGGCCGGGA GATGGACTGG
TACCCCGAGA AGATGTTCAG CCGCTACAAA CACTGGATCG AGGGCCTCGA GTGGGACTGG
CTCATCTCGC GCCAGCGCGA CTCGGGGATC CCATTCCCGG TCTGGTACTG CGCGGACTGC
GACCACGAGA TCATGGCCGA CCGGGAGACG CTCCCGGTCG ATCCGCTCTC GGACGAGCCG
CCCGTCGATA GCTGTCCCGA GTGCGGGGCT GACGACTTCG TCGCCGAAGA GGACGTCTTC
GACACGTGGG CCACCTCCTC GCTGACCCCC CTGATCAACG CGGGCTGGGA CTGGGACGAA
GACGCCGAGG AGTTCCGAAT GGAGAAACCG GAGCTGTACC CGTTCGACCT CCGTCCGCAG
GGCCACGACA TCATCTCGTT CTGGCTGTTC CACACCATCG TCAAGTGCTA CGAGCACACC
GGCGAGGTGC CCTTCGACGC GACGATGATC AACGGCCACG TCTTAGACGA GAACCGCGAG
AAGATGTCCA AGTCCCGTGG CAACGTCGTC GAACCCGACG AGGTGCTCGC CGACTTCCCC
GTCGACGCCG TCCGCTTCTG GGCCGCGAGC GCGGCGGTCG GCGACGACTT CCCGTATCAG
GAGAAGGACC TCACCGCGGG CGAGAAGCTC CTGCGCAAGC TCTGGAACGC CTCAAAGCTC
GTCGACACGC TCGCGCCCCG CGAGCCCGAG GAACCCGCGG AGCTCGAGGC GATCGACCGC
TGGCTGCTGG CGGAACTCGA CGACGCCGTC GACGATCTGA CCGCCCACCT CGAGGAGTAC
GAGTTCGCGA AGGCCCGCGA TCGGCTGCGG ACCTTCTTCT GGAACACGTT CTGCGACGAC
TATCTCGAGA TCGCCAAGAC GCGCGAGGAC GAGCCGTCGA CGCAGTACGC GCTGCGGACG
GCCCACCGGA CCTTCCTCGA GCTGTGGGCG CCGTTCCTGC CCCACGCGAC CGAGGAGATC
TGGCAGGCCG TCTACAGCGA TGATCCCGCG GACCTCGAGA ACACCAGCAT CCACGTCCGC
GACTGGCCCA GCCCGCAGGG GTACGAGGCC GACCTCGAGG CCGGCGAGGC CGCCATGGAC
GTCATCTCGG CGCTCCGGCG CTACAAGAGC GAGAATCAGC TGCCGCTGAA CGCCGATCTC
GAGTCGGTGT CGGTCTACGG CCCCATCGAA GGCTTCGAGG ACGCCATCCA GAACGTCATG
CACGTCCAGG AGCTGACCGT CCTCGAAGAA GAACCCGAGG TCACCACCGA GATCGCGTCG
ATTGACCTCG ACTACTCGAC GCTCGGACCG AAGTTCGGCT CGAAGGTCGG CGAGATCGAT
TCCGGAATCG AGAGCGGCGA GTACGAGATC GTGAGCGCGG AGCAACGCTC CGCGGAAGAG
TCGAGTAGCG CGGAACGAAG TTCCGCGGAC AGTCGAGCGG CGCAGCCGCG AGACGACGGC
GATGAGCCGC GAGACCGAGA TGACGGCGTG CTCCGCGTCG CCGGCGAGGA ACTCGAGGAC
GACCTCTTCG AGGTCGAACG CGAGCGTACC TACTCGGGCG AGGGCGAGAT GATCGAGACC
GAATCGGCGG TCGTCATCCT CGAATAG
|
|---|
| Protein sequence | MSTDAPESEP ESDPADSEPT LEGGYDPEAV EDRWQRRWID ADVYAYESDA ERDPNTVYAI
DTPPPTVSGS LHMGHLYGST LQDFAARYQR MADGDVLFPF GYDDNGIASE RLTESELDIR
HQDYERREFQ ELCREVCQEY EAEFTEKMQD LGTSIDWNNT YKTIEPRVQR VSQLSFLDLY
EKGREYRKKA PAIWCPDCET AISQVEMEDD ERGSHFNDIA FDVASDGADR EEFVISTTRP
ELIPACVSVF VHPDDEENQD LVGETARVPI FEQEVPIIED ERVDMEKGSG VVMCCTFGDQ
NDIEWYQAHD LPLRVAIDES ATMTDLAGDY EGMSTEEARE AIVEDLEDEG YLRDRWEISH
AVQVHERCDT AVEYRVSKQW YVEILDHKEE YLEAGREMDW YPEKMFSRYK HWIEGLEWDW
LISRQRDSGI PFPVWYCADC DHEIMADRET LPVDPLSDEP PVDSCPECGA DDFVAEEDVF
DTWATSSLTP LINAGWDWDE DAEEFRMEKP ELYPFDLRPQ GHDIISFWLF HTIVKCYEHT
GEVPFDATMI NGHVLDENRE KMSKSRGNVV EPDEVLADFP VDAVRFWAAS AAVGDDFPYQ
EKDLTAGEKL LRKLWNASKL VDTLAPREPE EPAELEAIDR WLLAELDDAV DDLTAHLEEY
EFAKARDRLR TFFWNTFCDD YLEIAKTRED EPSTQYALRT AHRTFLELWA PFLPHATEEI
WQAVYSDDPA DLENTSIHVR DWPSPQGYEA DLEAGEAAMD VISALRRYKS ENQLPLNADL
ESVSVYGPIE GFEDAIQNVM HVQELTVLEE EPEVTTEIAS IDLDYSTLGP KFGSKVGEID
SGIESGEYEI VSAEQRSAEE SSSAERSSAD SRAAQPRDDG DEPRDRDDGV LRVAGEELED
DLFEVERERT YSGEGEMIET ESAVVILE
|
|---|
| |