Gene Htur_3017 details

Gene Information

• Locus tag: Htur_3017
• ID: 8743635
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: -
• Start bp: 3099403
• End bp: 3101322
• Gene Length: 1920 bp
• Protein Length: 639 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 646513602
• Product: ABC transporter related protein
• Protein accession: YP_003404558
• Protein GI: 284166279
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTACCA ACGAAGACGA AACGCCGTTC GATGCCTACC GCGAGCACGT CGAGCGACCG 
CTGTGGCGAC TCTTTCAGGA ATACGCGCCC GATCGATTGG GCTGGTTCAC CGCGGGGATG 
CTCGCCAACT TCGTCGCCCG AATGGCGAGT CTCGTGCCGC CGCTGTTGCT GGGTACTGCT 
ATCGACGCGA TCTTCACCGG CGACGGCGCG TTCGAGTTGC CGATCGTTCC CAACGCCTGG 
CTGCCGACCG CGCAGATGGC CCAGTTCTGG TTCTCCATCG CCGCCATCGC GGTCTCGTTT 
CTCGTCGTCG CCCTCTTTAC CTGGATCTAC GGCGTCACCG CCAATCTGTT CGCGCACGGC 
GTGATGCACG CCGTGCGCGT CGACTCCTTC GAGAAGATGC AGCGCCTCGA CATGACCTTC 
TTCGACGACA AGGAGACCGG CGAGGTCATG GCGGTGTTGA ACAACGACAC GCAGAACCTC 
GAGATGTTCC TCGACAACGC GCTGATGAAC TCCGCGCGGC TGCTGGTGAT GGTCGGCGGG 
ATCGCCGGCG TCCTCTTCTA TCTCAACTGG CAGCTGGCGC TCGTCACCCT CGTCGCGATC 
CCGGCGATGG TCGCCTTCAC GATCTGGTTC ATGCGCGTCG TCGAACCGCG GTACGCCCGC 
CAGCGCTCGG CCGTCGGCTG GCTCAACACC CGCCTCGAGA ACAGCCTCTC GGCGGTCACG 
CTGACGAAGG CGACCAACAG CGAGTCCCAC GAGATCGATC GCGTGCGGCA GGCGTCGCGG 
CGGCTCTACG AGGACACGAT GGCCGTCCTC CGGCTTTCGT ACTTCTACCG GCCCGGGATG 
GAACTGCTCG CCGGGCTCGC CTTCGCCGGG ACCTTCCTCG TCGGCGGCCT CTGGCTCGCC 
ACCGGCACGG CGCCCGGCCC GCTGACCGGC ACCCTCTCGG TCGGCGACTT CGTCGTCTTC 
CTCTTCATGA CCCAGCGGAT CGTCGCGCCG CTGGCCGAGG TGTCGAACAT CGTCGACCAG 
TACGAGAACG CCAAGGCCTC GAGCGAGCGC GTCTTCGGGC TGATGGACAT TCCCGTCCGC 
GTCGACGATC CCGAGGATCC GGTCGACCTC GACGAGATCG AGGGTCGCGT CGAGTACGAG 
GACGTCACCT TCAGCTACGA CGCCAGCGAG GCCCACGTCG GCGAGGAGAC GGCCTTCGAG 
GAGTCCGTGA TCCGGGACGT CTCCTTTACG GCCGAACCCG GCGAGACGGT CGCGTTCGTC 
GGGCCGACCG GCGCCGGCAA GTCGACGCTC GTCAAACTGC TCCTCCGGCT GTACGACGTG 
GAGTCGGGAT CGATCCGGAT CGACGGCCAC GACGTCCGCG AGCTCTCGCT GGCCGATCTC 
CGATCGTCGA TCGGCTACGT CAGTCAGGAG ACGGTGCTCT TCGACGGGAC CATCGCGGAC 
AACATCCGTT ACGGCCAGTT CGAGGCCGAC GACGAGGCGA TCCGCGAGGC CGCGCGGGCG 
GCGCAGGCCC ACGAATTCAT CACCGGCCTC CCGGACGGCT ACGAGACCCG TGTCGGCGAG 
GAGGGCGTTA AGCTCTCGGG CGGCCAGCGA CAGCGGATCG CGCTCGCGCG GGTCGTCCTC 
GCGGATCCGG CGCTCGTCGT GTTAGACGAG GCGACCAGCG CCGTCGACAC GAAGACGGAG 
CTCCAGATTC AGCGGTCGAT CGACCGACTC ACCGCGGAGC GGACGACGCT GACGATCGCC 
CACCGCCTCT CGACGATCAA GGAGGCGGAC ACGATCCTCG TCGTCGAGGA CGGCGAAATC 
GTCGAACGCG GGGAGCACGA GGAGTTACTG GAAGCAGACG GGCGGTACGC GATGTTGTGG 
GCGGCCCAGG CCGGGGATCG CGAAACGGCC GCCGAGGCAC TGACCGAGGG GGACGACTGA 

 

Protein sequence

MSTNEDETPF DAYREHVERP LWRLFQEYAP DRLGWFTAGM LANFVARMAS LVPPLLLGTA 
IDAIFTGDGA FELPIVPNAW LPTAQMAQFW FSIAAIAVSF LVVALFTWIY GVTANLFAHG 
VMHAVRVDSF EKMQRLDMTF FDDKETGEVM AVLNNDTQNL EMFLDNALMN SARLLVMVGG 
IAGVLFYLNW QLALVTLVAI PAMVAFTIWF MRVVEPRYAR QRSAVGWLNT RLENSLSAVT 
LTKATNSESH EIDRVRQASR RLYEDTMAVL RLSYFYRPGM ELLAGLAFAG TFLVGGLWLA 
TGTAPGPLTG TLSVGDFVVF LFMTQRIVAP LAEVSNIVDQ YENAKASSER VFGLMDIPVR 
VDDPEDPVDL DEIEGRVEYE DVTFSYDASE AHVGEETAFE ESVIRDVSFT AEPGETVAFV 
GPTGAGKSTL VKLLLRLYDV ESGSIRIDGH DVRELSLADL RSSIGYVSQE TVLFDGTIAD 
NIRYGQFEAD DEAIREAARA AQAHEFITGL PDGYETRVGE EGVKLSGGQR QRIALARVVL 
ADPALVVLDE ATSAVDTKTE LQIQRSIDRL TAERTTLTIA HRLSTIKEAD TILVVEDGEI 
VERGEHEELL EADGRYAMLW AAQAGDRETA AEALTEGDD