Gene Htur_2652 details

Gene Information

• Locus tag: Htur_2652
• ID: 8743265
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Haloterrigena turkmenica DSM 5511
• Kingdom: Archaea
• Replicon accession: NC_013743
• Strand: -
• Start bp: 2722015
• End bp: 2724063
• Gene Length: 2049 bp
• Protein Length: 682 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 646513240
• Product: alpha amylase catalytic region
• Protein accession: YP_003404201
• Protein GI: 284165922
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0366] Glycosidases

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATCAGC GACGACTGTG CACGGACGGA GGCGAACCTG GGTCCGATCG CGCGCTCGAG 
AGTGACGACG GCTCGCACCA TCCCGGGTCG CCGCGGTTCG TCGCCGTCGA CGAGGGGATC 
GTCGACCCGA ACGGAAACGA AATGGAGACG CGGGACGATC TCGCGCCGCG GAATCCGGAC 
GGCGACGCGA CGTACGCCTG GCGGGTGCTC GAGTCGCCCG AGGGCTCGAA CGCGATCCCG 
ACTGACGGCC CGATCGCCGA GTTCGAACCG GACGTACCGG GCGAGTACAC GCTCGCACTC 
GAGGCGTCCG ACGGACCCCA CGAGTTGACC GTCCGCGTGT TTCCCGAGGC GGACGAGGAC 
GCGCCGCGCC CGCAGGTCGA ACTCGACGCG ACGGTCGAGG GCGATCGGGT CCGTCTCTCG 
GCGACCGCGA GCGTCGTCAG CGACGGCGAC TCGAGCGTCG AGTACTACGT CGACGACCGG 
AACGGAGACG TGCTCGAGTC GGACGGCACG ATACCGATCG GTGCGATCGA CGAACCCGTC 
CGCGTCTACG CCGTCGCTGT CGACGAACGC CACTCGGTTC CGGACGCGAT CGAACTGGTC 
CCCGCCGACG ATGCGGCGGA CGAGCCGTCC GTCCGCGTCG AGCGTCCGTT CGAGTCGCCC 
GAGTGGGCCG TCGACGCGGT CGTCTACGAG GTCTTCACGC GTCGGTTCCC TGATCGGGAC 
GAGCCCACGT TCGAGACGAT CGCGGAGCGC CTCGATCACC TCGAGACCCT CGGAATCGAC 
GTCCTCTGGT TGACGCCGTT TCTCGATGCG AAGAGCGGAT TCGGGACACC CATGGAGAAC 
GGCGGGCCAC ACGGCTACAA CACGACGAAC TACTTCGGCG TCGACCCGGA CCTCGGGACG 
ATGGCCGGCC TCGAGGCGCT GGTCGACGCC TGTCACGAGC GGGACATCCG AGTCGTCTTC 
GACCTCGTGA TCAACCACAC CGCGGACACG CACCCCTTCT ACGAGGCCGC CGTCGACGAG 
ACGCATCCCG ACCACGAGCG CTATCGCGAC TGGTACCGGT GGGCGGACTT CGACGAGCGC 
GCTCCGGACA CCTACTTCGG CTGGGACGAC ATCCCGAATC TGAACTACGC CAACCCCGAG 
GTCCGCGAGT ACCTGCTCTC GGTCGTCGAC TTCTGGACCG AGCGCGTCGA CGGCTTTCGC 
GCGGACGTCG CCTGGGGCGT CCCCCTGAGC TTCTGGACCG AGGTGTCCGA CCGAGTGAGC 
GGCGCGGACA GCGACTTCTT CCTGTTAGAC GAGACGCTGC CCTCCGACGT CGAGATGGGC 
GGCGGGCGGT TTCACACGCA CCACGACGAC GTCCTCCACG ACACGCTCGA GGCGTTGGGG 
GCGTCGGTCG CGGGCGAGGC CGACAACGAG ACTGCCGCCG AAGCCGACGA GGCAGAAGCG 
GAAGAGGACG CGGTCGCCGA CGAGTTCACG GATTCCGCTG CCGGGATCGA CACGACGAGC 
GCCGACGCGA TCCTCGAGGC GGTCGAGGAC CGGCAGCGCC GCGGCGCGCA TCCGGACTCG 
GAGTGGCTGC TGTACGTCGA GAACCACGAC ACTGACCGGT ATCTCGACGA ATACGGCCGC 
GACGCGCAGC GGGCAGCGGG CGCGGCGACG TTCACCCTCC CGGGGTCGCC GATGCTCTAC 
TACGGTCAGG AGACGGGCGT GACCGGACGG CGCGATCCGA TGAACTGGGG CGCGTTCGAC 
GAGGACCTGC TCGAGTACTA CCGGCGGCTG ATCGACCTTC GTAACTCGCA TCCGGCGCTG 
CGGTCCGCGG CCGATCTCGA GTGCATCGAG TACGAGACGG ACACCGACGC CGCGGTCGCG 
TTCGCCCGCG CGGACCCGGC GAGCGGTCGC CGCGTCGTCG TGGCGTTTCA CTTCGGCGCG 
GGGACGGCGA GGGTCGAACT CGGCGAGTCC GTCACCGACG CCGAGCCCCT GCTCGGTGCC 
GACGCGCTCG AGTCCGGCGG AACCCTCGCA GTCGATTCGG TCGTGGTTCT CGAGGGAGAC 
GAGTCGTGA 

 

Protein sequence

MDQRRLCTDG GEPGSDRALE SDDGSHHPGS PRFVAVDEGI VDPNGNEMET RDDLAPRNPD 
GDATYAWRVL ESPEGSNAIP TDGPIAEFEP DVPGEYTLAL EASDGPHELT VRVFPEADED 
APRPQVELDA TVEGDRVRLS ATASVVSDGD SSVEYYVDDR NGDVLESDGT IPIGAIDEPV 
RVYAVAVDER HSVPDAIELV PADDAADEPS VRVERPFESP EWAVDAVVYE VFTRRFPDRD 
EPTFETIAER LDHLETLGID VLWLTPFLDA KSGFGTPMEN GGPHGYNTTN YFGVDPDLGT 
MAGLEALVDA CHERDIRVVF DLVINHTADT HPFYEAAVDE THPDHERYRD WYRWADFDER 
APDTYFGWDD IPNLNYANPE VREYLLSVVD FWTERVDGFR ADVAWGVPLS FWTEVSDRVS 
GADSDFFLLD ETLPSDVEMG GGRFHTHHDD VLHDTLEALG ASVAGEADNE TAAEADEAEA 
EEDAVADEFT DSAAGIDTTS ADAILEAVED RQRRGAHPDS EWLLYVENHD TDRYLDEYGR 
DAQRAAGAAT FTLPGSPMLY YGQETGVTGR RDPMNWGAFD EDLLEYYRRL IDLRNSHPAL 
RSAADLECIE YETDTDAAVA FARADPASGR RVVVAFHFGA GTARVELGES VTDAEPLLGA 
DALESGGTLA VDSVVVLEGD ES