Gene Htur_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_2387 
Symbol 
ID8742994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp2454184 
End bp2454873 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content65% 
IMG OID646512971 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003403938 
Protein GI284165659 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCAGT ACGAACTTCG GCTCTCGCCG CAGGGTGGCT GGTTTCATCC GTTCGAAAAG 
CGGATCGATC GCCGCGAAGG GGTCGATCGC GTGGCGATCC ACCGGATCCG TCTCCGCCCC 
GACGGGCTCG GGGTGATGGT CTACGAACTC GCGGGAGAGT TCGAACGCGT CGAGGCGCTC 
GTCGACGAGG AGCTCGGCTC GCTCGGCTAC TGGATCGAGG AGTTCGGCGA CCGAATTTTC 
GTCTGTTCGC GGTTCGTTCC CAACGACACC GTCAGCGAAC TCCTGCGGGT GACGCGGGAC 
TTTCAGGTGT TCCTCGACCC GCCGCTGACG TACGTCCGCG GTGGCGACCT CAAGGTGTCG 
CTGTTCGCGA CCGAGGAGTC GTTCCAGCGG GCACGGTCGG TCGTGCCCGA CACCGTCGAT 
CTCACCCTCG AGACGAAACA ACCGTTCGAA CCCGAGGAGA ACGTCTTCCT CGCGTCGCTC 
ACGCCGAAAC AGCGCCGACT GTTCGAGACG GCGATCGAAC TCGGCTACTA CGGCTCGCCT 
CGAGAGACGA CCTACGAGGA GATCGGTCGC GAGGTCGGTA TCGCGGGCGG GACGGTCGGC 
GAACACCTCC GGAAGATCGA GGCGAAGCTC GTCGATCACG TCGTCTCGGC CTCGGTCACG 
GAGTCGCCGA AGCGCCGACA GCTCCAGTAA
 
Protein sequence
MRQYELRLSP QGGWFHPFEK RIDRREGVDR VAIHRIRLRP DGLGVMVYEL AGEFERVEAL 
VDEELGSLGY WIEEFGDRIF VCSRFVPNDT VSELLRVTRD FQVFLDPPLT YVRGGDLKVS 
LFATEESFQR ARSVVPDTVD LTLETKQPFE PEENVFLASL TPKQRRLFET AIELGYYGSP 
RETTYEEIGR EVGIAGGTVG EHLRKIEAKL VDHVVSASVT ESPKRRQLQ