| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_2254 |
|---|
| Symbol | |
|---|
| ID | 8742858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 2323168 |
|---|
| End bp | 2324127 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 646512837 |
|---|
| Product | protein of unknown function DUF106 transmembrane |
|---|
| Protein accession | YP_003403807 |
|---|
| Protein GI | 284165528 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1422] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGTA CAGCGGAGAA AATCAACGAC CTCGTCCGGG AGGACTCCTC CATGACGGCG
GCCCTCGAGG CCATTCGCGA GGCTGCCGAC CGGAACGGGG GCGAGGTCCA CTGGGCCGAC
GTCAACGACG ACTTGACGAG CGGTCAATGG GGCCGATTGA TCGAGAAAGG AGTACTGGTC
GACGGCGACG ACGGGTTCGA GATCGCCGAC CGCGAGGCGT ACGACAGAGC CCTCGACGGA
GACGGCGACG GTGGAAGCGC CGCCGCCGAC GCCGACGTCG ACATCGATGA CGAACAGTCC
AAGTGGTCGC AGTGGGACAA ACTGGCCGGC ATGGGCTCGC TGCTGTTGAT GTTCGGGTAC
TGGATCGATT CCGTCCAGCA GACCGTCGGT AGTACGATCA ATATCGTGCT CGGTCCCCTG
GACGCGGCGC TGCCGTTTTA CGCCGTGATC CTTTCGGTCG CCCTGCTGAC GGGACTGTAC
TCGACGCTGC TGCAGGCCAA CCTGATGAAT CCCGAAGTGA TGGGCAAGTA CCAGGAGCGC
ATGCAGGCCA TGCAGGAGAA ACAGAAGGAC GTCCGCGAGC GCAAGCAGGA AGCCGAGGAG
CGCGGCGCCA GCGAGGCCGA AATCGAGCGC CTCGAGGACG AGCTCGAGGA GGTTCGCGAG
GAGCAGATGG AGGCCATGGC CCAAAACCTC GGGATGTTCA AAGAGCAGAT CCGACCGATG
GTCTGGATCA TGCTGTTGAC CATCCCGCTG TTCCTCTGGA TGTACTGGAA GGTCCAGAGC
GGCGGGCTTG AGGGCAGCGA CGCGTCGGTT ATCATGCCGC TGGCCGGTGA GGTCAAGTGG
AACTCGACCC TGTTCGGTCC GCTGCGGGCC TGGATCGTCT GGTACTTCCT GTGCTCGATG
GGCTTCTCCC AGCTGCTGCG CAAGGCCCTG AACATCGATA TGTCGCCCTC GAGCGCCTGA
|
|---|
| Protein sequence | MTRTAEKIND LVREDSSMTA ALEAIREAAD RNGGEVHWAD VNDDLTSGQW GRLIEKGVLV
DGDDGFEIAD REAYDRALDG DGDGGSAAAD ADVDIDDEQS KWSQWDKLAG MGSLLLMFGY
WIDSVQQTVG STINIVLGPL DAALPFYAVI LSVALLTGLY STLLQANLMN PEVMGKYQER
MQAMQEKQKD VRERKQEAEE RGASEAEIER LEDELEEVRE EQMEAMAQNL GMFKEQIRPM
VWIMLLTIPL FLWMYWKVQS GGLEGSDASV IMPLAGEVKW NSTLFGPLRA WIVWYFLCSM
GFSQLLRKAL NIDMSPSSA
|
|---|
| |