Gene Htur_1808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_1808 
Symbol 
ID8742402 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp1880557 
End bp1881594 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content65% 
IMG OID646512386 
Productintegrase family protein 
Protein accessionYP_003403366 
Protein GI284165087 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAGG GCCGTCAGGA GCCAAACACG GTCGAATACT TCCTACAGGA CATCGAGCAC 
CACGGCCGGA ACGAACGGAC CGCAGCGGCC TACGAACGGG TCCTCTCGGA CTACGAAGAG 
TTCCTCGCCG CTCGATTCGA GAAGACCCCA CCGGAGGCGA GCTACCGGGA CTGCATGGCC 
TGGGTGCACG AACTTCGTGC TACCCATTCC GAAAGCACCG TCGCGACGTA CGCCTCGTAT 
CTCAACCGGT TCTACAGCTA CCTCGAGCGG GTCGGACACA CCGACGAGAA CCCGATGACC 
GTCGTCCTAG AGGAGATGAA CGAGTCGATC GAGTCGAACC CGACTCGACG CGACGTGACA 
CTGCCCGAGA TGCGGTCGTT CGTCGGGGAG ATTCGTCACC CGCTGCATCG GGCTATCGTG 
ACGATGCTGC TGAAGACCGG GATCAGGGCC GGCGAACTCT GCAATCTGGA CCTGATCGAC 
CTCCACATCG ACCACGAGGC CCAGAGCTGG CAGCCGCGGG CCCACATCGC CGGCCGCCCG 
GATTCGCTGT TTATCGCGAC CGAGCACACC TACGGACGCG AATCCGGCGG CGAGCGGCGG 
ACAGCATCGA ACAAACGGAA ACGCGAGACC GTCGTCCCGA TCGACGAGGA GTTGAAGGAG 
GCGTTGCTTC GATGGCTCGC CGTCCGTCCG GAGACGCCCT CGAGCGCGCC GTCAGCCCCT 
GCGACGGGGC CGCTGTTCGT CGGTACCGCC GACAGCTGGG GCGAGCGACT CACGCCGGAT 
ATCGTCCATC ACGTGGTCGA AGGGTACGCG AGAGACCGCG GCTGGTACCG CACCGGCGGC 
GGCGCCGCGG AGAACGTGAC GCCCCACTAC TTCCGGCACT TCTTCACGAC CCACCTCCGC 
GATCGGACGG GCGACCGCGG GATCGTCCAG TACCTCCGGG GCGACGTCGC CAGCGACGTG 
ATCGACACCT ACACCCACAA CTGGGGCGAC CGCGTCCGGG AGACCTACCT CGAGCACATC 
TATTCCGTGA CGCCCTGA
 
Protein sequence
MSEGRQEPNT VEYFLQDIEH HGRNERTAAA YERVLSDYEE FLAARFEKTP PEASYRDCMA 
WVHELRATHS ESTVATYASY LNRFYSYLER VGHTDENPMT VVLEEMNESI ESNPTRRDVT 
LPEMRSFVGE IRHPLHRAIV TMLLKTGIRA GELCNLDLID LHIDHEAQSW QPRAHIAGRP 
DSLFIATEHT YGRESGGERR TASNKRKRET VVPIDEELKE ALLRWLAVRP ETPSSAPSAP 
ATGPLFVGTA DSWGERLTPD IVHHVVEGYA RDRGWYRTGG GAAENVTPHY FRHFFTTHLR 
DRTGDRGIVQ YLRGDVASDV IDTYTHNWGD RVRETYLEHI YSVTP