| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_1065 |
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| Symbol | |
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| ID | 8741652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013743 |
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| Strand | + |
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| Start bp | 1102937 |
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| End bp | 1104547 |
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| Gene Length | 1611 bp |
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| Protein Length | 536 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646511643 |
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| Product | Type II secretion system F domain protein |
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| Protein accession | YP_003402630 |
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| Protein GI | 284164351 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2064] Flp pilus assembly protein TadC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCCGGT CCTGGCTGCC AGATACCACA CCGGTATCGA CCGTCGCCTT CCTCTACGCC
CTCTCGCGCA GCGGCATGGC CTTCCCGAAG GTAATCCGGG TCGTCGCCGC CCACGAGGCG
ACCTACGGCG AGGCCGCCGA GGAGTTCGAC GTCGCGGTCC GAAACATGGA CACCTTCGGC
GTCGACGTAG TCACCGCACT CCAGACGATG GGGCGGCGCT CGCCGAGCCC CCAGTTCCGC
GAGTTCAGCG AAAACCTGGT TAGCGTCCTC CAGAGCGGCC ACAGCCTCTT GGATTTCCTC
GAGCGCCAGT ATCGCGATTA CCAGGAGGAA GCCGAGTCCC ACCAGGAGCG GACCCTCGGA
CTGCTCTCGA CGCTCGCCGA AGCCTACGTG ACGGTGCTGG TCGCGGGTCC GCTCTTTCTC
ATCACGATCC TCGTCGTCAT CGGGATCGCC GTCGGCGACA CGCTCGAGCC GCTGCGGGCG
CTGATCTACC TCATCCTGCC CATTGGCAAC CTCGCGTTCG TGATCTATCT GGGCGTCGTC
ACCGACAAGC TGACGCCCGG CTCGGCGGCA ACGGACTCGA GCGAAGCTCC GTCGCTGGAT
CTCCCGGGCG ACATTGCGCG TGAGGCCCGA CCCGACGGCG GAGCCGCCGG TAGCGGCGCC
GTCGGTGCCG ACAGTCACCC GAACGTCAAA CGCCTCCGGT ACTACCGGCG GCTCCGCGGT
CTGCGAGAAC GGTTCGGAAA CCCCGTCAGG ACGCTGCTCG AGCGCCCGAC GCTCTCGCTC
GCGATCACCG TTCCGATCGC CCTCGCGGGC GTGCTGTGGC AGTTCCCGGC GGCGCTCGAG
GGAGGGTTCG ACGTCGCGGC GATCGACGAC GCGATCGCGG TGGGGCTGCT GGTCGTCCTG
ACCGGTTTCG CGATCCCGTA CGAGGGGCAC CGTCGCCGGA TCGACGCCGT TGAGGCGGCC
GTCCCGGACC TGCTCGACCG ACTCGCGAGC GTCAACGAGG CCGGCATGTC GCTGGTCTCG
GCGGTCGACT ACGTCCGCGG CTCTGAGCTG GGGCCGCTCG GCGCCGAACT CGATCGCGTC
TGGGCGGACG TCCAGTGGGG CGCCGACCTC CAGACCGCGT TCGCCCGACT CGAGCGGCGG
GTGCGAACCC GGACGACCGC CCGCGTCGTG ACCCTGCTCA CCGAGGCGAT GAACGCGAGC
GGGAACCTCG CGACCGTGCT CCGGATCGCC GCCCGGCAGG CCGCGGCCGA CCGGCGCCTC
GAGCGCGAGC GAAAGCAGGC GATGGTCGAG TACACCATCG TCGTCTACGT CTCGTATCTG
GTCTTCCTGT TTATCATCGC GGTGCTCGCG GCGTCTCTAC TGCCAAACCT GCCCGCAGAA
GGGGCCGATA CCGCGACCGC CACCGGTAGC TCCGCCGTCG GCGGACTCGG CGGCTTCTCG
GCGTCCGACC GGGCGACCTA CGACACGCTG TTCTACCACG CGACGCTCGT TCAGGGCCTG
CTGTCGGGGC TGATCGCCGG CCAGTTGAGT ACGGGCGATG TCAGGAGCGG GGCGAAACAC
GCCGCCGTCA TGGTCGGGCT GTCGGTCCTC CTCTTCGCCG TCATCGTCTG A
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| Protein sequence | MRRSWLPDTT PVSTVAFLYA LSRSGMAFPK VIRVVAAHEA TYGEAAEEFD VAVRNMDTFG
VDVVTALQTM GRRSPSPQFR EFSENLVSVL QSGHSLLDFL ERQYRDYQEE AESHQERTLG
LLSTLAEAYV TVLVAGPLFL ITILVVIGIA VGDTLEPLRA LIYLILPIGN LAFVIYLGVV
TDKLTPGSAA TDSSEAPSLD LPGDIAREAR PDGGAAGSGA VGADSHPNVK RLRYYRRLRG
LRERFGNPVR TLLERPTLSL AITVPIALAG VLWQFPAALE GGFDVAAIDD AIAVGLLVVL
TGFAIPYEGH RRRIDAVEAA VPDLLDRLAS VNEAGMSLVS AVDYVRGSEL GPLGAELDRV
WADVQWGADL QTAFARLERR VRTRTTARVV TLLTEAMNAS GNLATVLRIA ARQAAADRRL
ERERKQAMVE YTIVVYVSYL VFLFIIAVLA ASLLPNLPAE GADTATATGS SAVGGLGGFS
ASDRATYDTL FYHATLVQGL LSGLIAGQLS TGDVRSGAKH AAVMVGLSVL LFAVIV
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