| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_0883 |
|---|
| Symbol | |
|---|
| ID | 8741467 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | - |
|---|
| Start bp | 900332 |
|---|
| End bp | 901975 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646511461 |
|---|
| Product | extracellular solute-binding protein family 5 |
|---|
| Protein accession | YP_003402451 |
|---|
| Protein GI | 284164172 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACACA CTGGTGAGGG TGATTCTGAC CGAATCCCTC GTCGATCGGT GCTCGCCGGA
CTTGGGGGGT TCGGCATGGC CGGTGCGGCC GGCTGTATCA GCACCGATAT CGGGATCGAC
CTCGATAGCG ACCCCGAGAG ACTCATCTTC GAGGGCTTTC AGGAGGCGGG CGTCGAACCG
CCCGTCGAGA CGACGATTTA CTCGAACGCC GAGACCGAGG GGCGAAAGCG GTGGGCGCAG
TTGGTCCAGC ACGAACTGGA CGGCACCGAT CTGTTCGACG TCGAGTTCGA GACCCTCGAG
TGGACGTCCT ACATCGATCT GGTCAACAAC ATGGCCGCCA ACGAGGAGAA CGCGCTCGTC
TGTCTGGGGT TTATCGGCGG CTGGGATCCG CATCAGTACG TCTATCCTGG CTTTCACTCC
GACAGTTTCG CTCCGACCGG CCTCAACATC AACCACTACG AGAACGAGCG GGTCGACGAG
CTCATCGACG AAGGCGTTGC GACCGTCGAC GGCGACGAGC GCGTCGCGAT CTACGAGGAG
TTGCAGGAAC TCCTCGTCAA GGAATCGCCG CTGTCGTTCG TTCGCGCGCC CGAAGAGATC
GTCACCTACC GAGCCGACGC GATCGACGGA TTCCGGACGT ATCCGGTCCC CGGCGATGAG
TACAAGTCGA TCTACGCGCC GACGCTCGGC GTGTACACGG AGCTCACCAC CGACGAGACC
GAGCTCGTCG GCGACGCAGG GACGAAGATC GACAGCTACG ATCCGGTCCG GGCGGCCGAC
GACGTCTCGT ATATGGCCAC CGGCCTGCTC TACGAACAGC TCCTCGAGAT CGACTTCGAC
GGGAGCGCTC GGCCGCTGCT CGCGACCGAC TGGCACCGGA TCGACGAGAC GACCTGGCGG
TTCGACCTGC GAGAGGGCGT CCAATTTCAC ACCGGCGAGC CGTTTACCGC CGCGGACGTC
CGTGCGACCC TCGAGCGATA CGAGGGGTCG CCGAGCGAGC AGGACGTGTA CAACTGGTAC
GAGAGCGCAG AGATCCTCGG CGACCACGAG ATCGAAATTT CCCTCCGGCG GCCGTACGGG
CCGCTGGAAA CGGCGATCGC GCAGGTGCCG ATCCTCCCGA AGGCCGTCGC GGACGGCACG
CACGACATCA CCGAGCGACC GGTCGGAACC GGCCCGTACG CGTTCGAGGA ACACGAGCCC
GCCACCCTCT GGCGGCTGGT CGCCAACGAG GACCACTGGC ACGACGGGAG CAACGGCGTC
CCCGAGACGC CGCCGATCGA GACCGTGACG ATGCGGATCG TCACCGAATC GTCGGCCCGG
CGCGGCGCCC TCGAGGCGGG CGATATTCAC CTGACCACGG GGCTCCCGAA CGAGAGCCTC
GAGACGTTCG AAGCCGACGA CGCGTTCGTC GTCGACCGAA CGACCGGCGC CGCCGTCGAC
TTCCTCGGCT ATCCGAGCTA CCGCGAGCCG TTTTCCAATC CGAAGGTTCG GCGCGGGATC
GGCCAACTCA TCCCGCGCGA GCGGATCATC GAGGACGTGT TCCACGGCGC CGGCACCGTG
GCCTACACGC CGATCTCGCC GACCCACGAG ACCTTCGTCG GTCCAGAGTT CGAAGCGCGA
ATCGTCGAGG AGTACTTCAG CTAA
|
|---|
| Protein sequence | MAHTGEGDSD RIPRRSVLAG LGGFGMAGAA GCISTDIGID LDSDPERLIF EGFQEAGVEP
PVETTIYSNA ETEGRKRWAQ LVQHELDGTD LFDVEFETLE WTSYIDLVNN MAANEENALV
CLGFIGGWDP HQYVYPGFHS DSFAPTGLNI NHYENERVDE LIDEGVATVD GDERVAIYEE
LQELLVKESP LSFVRAPEEI VTYRADAIDG FRTYPVPGDE YKSIYAPTLG VYTELTTDET
ELVGDAGTKI DSYDPVRAAD DVSYMATGLL YEQLLEIDFD GSARPLLATD WHRIDETTWR
FDLREGVQFH TGEPFTAADV RATLERYEGS PSEQDVYNWY ESAEILGDHE IEISLRRPYG
PLETAIAQVP ILPKAVADGT HDITERPVGT GPYAFEEHEP ATLWRLVANE DHWHDGSNGV
PETPPIETVT MRIVTESSAR RGALEAGDIH LTTGLPNESL ETFEADDAFV VDRTTGAAVD
FLGYPSYREP FSNPKVRRGI GQLIPRERII EDVFHGAGTV AYTPISPTHE TFVGPEFEAR
IVEEYFS
|
|---|
| |