Gene Htur_0803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHtur_0803 
Symbol 
ID8741386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaloterrigena turkmenica DSM 5511 
KingdomArchaea 
Replicon accessionNC_013743 
Strand- 
Start bp822948 
End bp823610 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content61% 
IMG OID646511381 
ProductBacterio-opsin activator HTH domain protein 
Protein accessionYP_003402372 
Protein GI284164093 
COG category[R] General function prediction only 
COG ID[COG3413] Predicted DNA binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTTA TCGCCGAGTT CTCGGTCAAA TCCGACGACC TGGCGCTGTA CCACGCCCTC 
ACGGCCGCGC CGGGGATGGT CGTCGAGATC GAACAGGTCG TGGCGACGAT GGAGGACAGG 
GTGATGCCGT ACTTCTGGGT CAGCGGCGGC GATCACGCGG AGTTCGAGGC GGCGTTTCAG 
GAGGACGACT CCGTGACGGG CGTCGCCCCG ATCGACGAGG TGGACGGCGC CAGACTGTAT 
CGCGCCGAGT GGACGAAGAA CGTCGAAACG ATCGTCTACG CCTACGTCGA ACTCGGAGCG 
ACGATCCTGC AGGCGATCGG ACGGGACAAA AACTGGGAGC TCCGGATGCG GTTCGACGAT 
CGGGACAGCC TCGCGCAGTT TCAGGACTAC TGCGAAGACA AGGAAATCGC GTTCAAACTC 
AATCGTATCA AGGACCAGGA ACAGCCGATG GCCAGCGCTC AGTACGATCT CACGACGAAG 
CAACGCGAGA CGCTGGTCGC GGCGCTCGAG GAGGGGTACT ACGAAATTCC ACAGGGAATC 
ACGATGACCG ATCTCGCCGA CCGAATGGAC GTCTCCCAGC AGGCGCTCTC GAAGCGATTT 
CACGCCGCCC ATCGGAACCT CATCACGAGC ACACTGACGT TCTCTCATCC GGACGACGAG 
TGA
 
Protein sequence
MSVIAEFSVK SDDLALYHAL TAAPGMVVEI EQVVATMEDR VMPYFWVSGG DHAEFEAAFQ 
EDDSVTGVAP IDEVDGARLY RAEWTKNVET IVYAYVELGA TILQAIGRDK NWELRMRFDD 
RDSLAQFQDY CEDKEIAFKL NRIKDQEQPM ASAQYDLTTK QRETLVAALE EGYYEIPQGI 
TMTDLADRMD VSQQALSKRF HAAHRNLITS TLTFSHPDDE