| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_0335 |
|---|
| Symbol | |
|---|
| ID | 8740900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | - |
|---|
| Start bp | 353848 |
|---|
| End bp | 356019 |
|---|
| Gene Length | 2172 bp |
|---|
| Protein Length | 723 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646510900 |
|---|
| Product | DEAD_2 domain protein |
|---|
| Protein accession | YP_003401909 |
|---|
| Protein GI | 284163630 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1199] Rad3-related DNA helicases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTCCGAGA CAGCCGGGTA CATGCGCTTT TTCCCGTACG ACCAGCCGTA CGAGAACCAG
CGCGAGGCGA TGGACCGCAT CCACAACTCG CTGACCCGCG GCCAGGATGT CCTCTTCGAG
GGCGCCTGCG GGACCGGCAA GACCCTCTCG TCGCTGGTCC CCGCCCTCGA GGTGGCCCGC
GAGCAGGACA AGACGGTCGT CATCACGACC AACGTCCACC AGCAGATGCG CCAGTTCGTC
GCCGAAGCCC GCGCGATCAC CCGCGAGGAG GACATTCGGG CGATCGTGTT CAAGGGGAAA
TCCTCCATGT GTCACATCGA CGTCGGCTAC GAGGAGTGCC AGGCCCTGCG GGACAACACC
CGCGCCGTCG TCGACGCCGA GCGGGACAAA CGGCAACTCG AGCGCCGCCA GCGCGAACTA
CTGGAGGAGA GTCAGGGCGG CGACGGCGGC GCGGCCGACG CCCGCTCGGC GGTGATGGAC
GAACTCGAGT CCATCGAGGA GCGACTCGAG GACTTAGAAG AACAGAACGT CTGCGACTAC
TACCGCAATA ATCTCACCCA GGATACGGAC GACTTCTTCG CGTGGCTCTT CGAGGACGTC
CGGACGCCGG AGGAGATCTA CGAGTACGCC GAACGGGAGG GCTTTTGCGG CTACGAACTG
CTGAAGGAGG GGATCGAGGG CGTCGACCTG GTCGTCTGTA ACTACCACCA CCTGCTGGAC
TCGATGATCC GCGAGCAGTT CTTCCGATGG CTCGGCCGCG ATCCGGAGGA CGTCATCGCC
GTCTTCGACG AGGCCCACAA CGTCGAGGAC GCCGCCCGCG AACACGCCAC CCGAACCTGC
TCCGAGCGGA CCTTCGACTC CGCGCTCGAC GAGTTGGCCG ACGCCGACGA CCCGCGATCC
GAGGACGCCG CCAACGTCCT CTCGGCCTTT CACCGTGCGC TCGTCGAGAC CTACGAGGAC
TCGTTCGGTT TCGGCGAGCG CGAGCGGATC GACGAGAACT GGGAGGATAT CTCGATCGCC
AACGAAGACC GGAAGGACGA TCTCACGCTC GAGTTCCTGC AACGGTACTC CGGTCGGGGG
ATCGAGGACG ATCTCGAGGC CGCGATGAAA CTGGGCCAGG AGCTAGACGA GCAGTACGAG
GAGGCCTACC GCGAGGGCGA GACCGCCACG CGGACAGAGT GTCAGACCTT ACAGGCCGCG
GCGTTCGTCA GCGCCTGGAT GAACGAGGGG AGCAAGGAGG GACTCTACCC GGTCGTCTCC
GTCACTCGAG ACGCGGGCAC CGACGAAATC TACGGCCGCG CGGAGCTGTA CACCTGTCTC
CCCCGCCAGG TCACGGGCCG GCTGTTCGAG GAGGTGTACG GAACGATCCT GATGAGCGCG
ACGCTGCAGC CGTTCGACGT CACCGAGGAC GTGCTCGGCC TCGAGGACCC CGTCACGATG
GCCTACGGGC TCCAGTTCCC GGCTGAACAC CGACGGACCT ACGCCGTCGA GACGCCGCCG
CTGTTTTCCT CGGACCGGGA CGACCCCGCG GTCCAGGAGG AAGTCGCGGA GACGATCCAC
GACGCCGTCC GCATGACCCC GGGGAACACC CTCGCCTTCT TCCCCAACTA CGGGGAGGCC
GAGCGATACG CAAAGCGACT CGAGGGGCGG ACCGAAAAGA CGGTCTATCT GGACGAGCCC
GGGACGTCCG TCGAAGAGTT ACGCCAGCAG TTCGTCGCGG ACGACGGCGC CGTGCTCTGT
ACCTCATTGT GGGGAACGCT GGCGGAGGGC GTCAGTTTCG ACGGCGACGA CGCACACACC
GTGCTGGTCG TCGGCGTTCC GTACCCCCAC CTCGACGACC GCGCCGAGGC GGTTCAGGAG
GCCTACGACG CGGCGTTCGA CGGGACCGAG ACGGGCTGGC GCTACGCCGT CGAGATCCCC
ACCGTTCGGA AGACCAGACA GGCGCTGGGC CGCGTGATCC GCTCGCCCGA GGACGTGGGC
GTTCGCGCGC TGCTGGACCG TCGCTACTCG AGGTCCGCGA AATCGGACCT CGGTCGGTAC
AGCGTCAACG GCACCTTCCC CCACGAGGAG CGCGAGGAAC TGATCGACAT CGACCCCGAG
AAGCTGAAGT TCTCGATGCT GAACTTCTAC GGCGATCACG ACGCCTACGA CGGCGAGACG
CCGGCGCCGT AG
|
|---|
| Protein sequence | MSETAGYMRF FPYDQPYENQ REAMDRIHNS LTRGQDVLFE GACGTGKTLS SLVPALEVAR
EQDKTVVITT NVHQQMRQFV AEARAITREE DIRAIVFKGK SSMCHIDVGY EECQALRDNT
RAVVDAERDK RQLERRQREL LEESQGGDGG AADARSAVMD ELESIEERLE DLEEQNVCDY
YRNNLTQDTD DFFAWLFEDV RTPEEIYEYA EREGFCGYEL LKEGIEGVDL VVCNYHHLLD
SMIREQFFRW LGRDPEDVIA VFDEAHNVED AAREHATRTC SERTFDSALD ELADADDPRS
EDAANVLSAF HRALVETYED SFGFGERERI DENWEDISIA NEDRKDDLTL EFLQRYSGRG
IEDDLEAAMK LGQELDEQYE EAYREGETAT RTECQTLQAA AFVSAWMNEG SKEGLYPVVS
VTRDAGTDEI YGRAELYTCL PRQVTGRLFE EVYGTILMSA TLQPFDVTED VLGLEDPVTM
AYGLQFPAEH RRTYAVETPP LFSSDRDDPA VQEEVAETIH DAVRMTPGNT LAFFPNYGEA
ERYAKRLEGR TEKTVYLDEP GTSVEELRQQ FVADDGAVLC TSLWGTLAEG VSFDGDDAHT
VLVVGVPYPH LDDRAEAVQE AYDAAFDGTE TGWRYAVEIP TVRKTRQALG RVIRSPEDVG
VRALLDRRYS RSAKSDLGRY SVNGTFPHEE REELIDIDPE KLKFSMLNFY GDHDAYDGET
PAP
|
|---|
| |