| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_0187 |
|---|
| Symbol | |
|---|
| ID | 8740750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | - |
|---|
| Start bp | 205915 |
|---|
| End bp | 207582 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646510750 |
|---|
| Product | ammonium transporter |
|---|
| Protein accession | YP_003401761 |
|---|
| Protein GI | 284163482 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0004] Ammonia permease |
|---|
| TIGRFAM ID | [TIGR00836] ammonium transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCCGA CACTCTTGCA GAGCGAAACG GAGATCGAGA TGCTGATGGA GGCGGTCAAC
TACACGTGGA TCCTGGTCGC GACGTTCCTG ATCTTCTTCA TGCACGCCGG CTTCGCCATG
CTCGAGGCGG GGCAGGTGCG CTCAAAGAAC GTCGCCAACC AGCTGACGAA GAACCTGCTG
ACCTGGTCGG TCGGCGTGAC GGTGTTCTTC CTGATCGGAT CGACCGTTGA GGGACTCGTG
GCCGGCAACG GCTTCGCGTT CCAGTTCAAC GCCGAGGCTG TCAGCTGGAT GGACTGGTTG
TACGGCGCCG TCTTCGCGAT GACGGCGGCA ACCATCGTTT CCGGGGCCGT CGCCGGCCGT
GCGAAACTCC GCGCGTACGT TACGTACACC TTCCTGCTGG CCGCGGTCAT CTACCCAGTC
GTTACCGGAA TGACCTGGGC CGGCGGCCAC GTCGAGTCGA TCGTCGGCAC GCCGTTCTCC
GACTTCGCGG GCGGAATGAT CGTCCACGGC ATGGGCGGCA TCGCCGGACT CACCGCCGCG
TGGATCCTCG GACCGCGCAT GGACCGGTAC AACGACGACG GGAGCGCCAA CGTCATTCCC
GGTCACTCGC TGACCTTCGC CGTGCTCGGA ACGCTCATCC TCGCGTTCGG CTGGTACGGC
TTCAACGTCG GGACTTCGGC GATCTTCACC GAGGGCTCCT TCGACGGAGC CATCCTCGGT
CGCGTCGCCC TGACCACCAC GCTCTCGATG GCCTGCGGGG CGATGGGTGC CGGCCTCGTC
GCGCTGCTCA AGACCGGCAA GGTTGACACG CTCTACGTTG CAAACGGCCT GCTCGCCGGC
CTCGTCGGGA TTACCGCGAT CCCCGACGCC TCGACCTGGT GGGGCGCGAT CCTCGTCGGT
ACGCTCGCCG GCGCACAACT CCCCATCGTC TTCGGACTCA CCGAGAGCAT TGGTATCGAC
GACGTCTGTG CGGTCTTCCC CGTGCACGGC TCGGCCGGCG TCCTCGGGAC GCTGCTGTTC
CCGGTCGTCG CCACGACCGA GTACATGAAC GAACTCGGTG CCACCCGCCC CGAAGCGTTC
GTCGCTCAGG TTACCGGCGT CGTCGCCATC ACCGTCTGGA CGGTCGGCAT GACCGCCCTC
ATCTGGTTCC TCTTCAAGCT GGCGGGTCAG GCTCGAGTCA CGCCCGAACA CGAGCGCAAC
GGACTCGACG TCTCCGAACA CGGCGTCGAC ACCTACCCCG AGTTCGGTCA GCCTGACGTC
GCGACCGATG GCGGAACGGA CGACGGCAAG GTCATTCGCA CCGATGGCGG CAAGCCCAAC
GACGGCGAGC TTAAGATGAT CACCGCGATC ATCCGCCCCG ACAAGCTGGG CGACGTCAAG
AAGGGGCTCG CCGAGATCGG CGCGCCGTCG CTGACGGTCA CCAACGTCTC TGGCCGCGGC
TCCCAGCCCG CCAAGAAGGG CCAGTGGCGC GGCGAGGAGT ACACGGTCGA CCTCCACCAG
AAGGTCAAGA TCGAGTGCGT CGTCGCCGAC ATCCCGGCCC AGGACGTCGT CGAAGCCATC
GGCGAGGCCG CTAACACCGG CGAACCCGGT GACGGCAAGA TCTTCGTCCT GCCCGTCGAG
GACGCCTACC AGGTCCGGAC CGGTAAGACC GGACAGGATG CCGTCTAA
|
|---|
| Protein sequence | MEPTLLQSET EIEMLMEAVN YTWILVATFL IFFMHAGFAM LEAGQVRSKN VANQLTKNLL
TWSVGVTVFF LIGSTVEGLV AGNGFAFQFN AEAVSWMDWL YGAVFAMTAA TIVSGAVAGR
AKLRAYVTYT FLLAAVIYPV VTGMTWAGGH VESIVGTPFS DFAGGMIVHG MGGIAGLTAA
WILGPRMDRY NDDGSANVIP GHSLTFAVLG TLILAFGWYG FNVGTSAIFT EGSFDGAILG
RVALTTTLSM ACGAMGAGLV ALLKTGKVDT LYVANGLLAG LVGITAIPDA STWWGAILVG
TLAGAQLPIV FGLTESIGID DVCAVFPVHG SAGVLGTLLF PVVATTEYMN ELGATRPEAF
VAQVTGVVAI TVWTVGMTAL IWFLFKLAGQ ARVTPEHERN GLDVSEHGVD TYPEFGQPDV
ATDGGTDDGK VIRTDGGKPN DGELKMITAI IRPDKLGDVK KGLAEIGAPS LTVTNVSGRG
SQPAKKGQWR GEEYTVDLHQ KVKIECVVAD IPAQDVVEAI GEAANTGEPG DGKIFVLPVE
DAYQVRTGKT GQDAV
|
|---|
| |