| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_0024 |
|---|
| Symbol | |
|---|
| ID | 8740587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haloterrigena turkmenica DSM 5511 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_013743 |
|---|
| Strand | + |
|---|
| Start bp | 23438 |
|---|
| End bp | 24583 |
|---|
| Gene Length | 1146 bp |
|---|
| Protein Length | 381 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 646510587 |
|---|
| Product | Sarcosine oxidase |
|---|
| Protein accession | YP_003401598 |
|---|
| Protein GI | 284163319 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
|---|
| TIGRFAM ID | [TIGR01377] sarcosine oxidase, monomeric form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTCGCAA CAGGAACCCG ATACGACGTT ATCGTGATCG GCGTCGGCGG AATGGGCAGC
GCGACGGCCG CTCACCTCGC CGACCGCGGC AGCGACGTGC TCGGCCTCGA GCGCTACGAC
GTGCCAAATA CGATGGGCTC TTCCCACGGG ATCACCCGGA TCATCCGGCG CGCCTACTAC
GAGCACCCTT CCTACATTCC GCTCGTCGAA CGGGCCTACG AGCTCTGGGA CGACCTCGCG
GACGAGACCG GCCGCGACGT GATCCACCGG ACGGGATCGA TCGACGCCGG TCCCCCGGAT
AACATCGTCT TCGAGGGGTC GCTGCGCTCC TGCGAGGAAC ACGACATTCC CCACGAGGTC
CTCACGAGCG CGGAGGTCGC CGAGCGGTTC CCCGGCTACG ACCTCCCCGA GGGGTACAAG
GCCTTGTACC AGCCCGATGG CGGGTTCGTG GTCCCCGAAC AGGCGATCGT CGGCCACGTC
GAGACGGCCC AGGCGGCGGG CGCCGAGGTG CGCGCCCGCG AGCGCGTCCT CGAGTGGGAG
TCGACGTCGG ACGAGGGCGT CCGCGTCGAA ACCGATCGCG GGACCTACGA AGCCGAGAAC
ATGGTGCTCG CCGCGGGGGC GTGGAACTAC AAGTTCGCCG ACGTGCTCGA GGATCTCGCG
GTCCCCGAGC GGCAGGTACT CGGCTGGTTC CAGCCCGATC GGCCGTCGAC GTTCGAACCC
GAGAACTTCC CGGTCTGGAA CCTCAAGGTC CCCGAAGGCC GCTTCTACGG GCTGCCGATC
TACGACGTGC CGGGGTTCAA GATCGGCAAG TACCACCACC GGGACAAACA GGTCGATCCC
GACGACTACG AGAGGGAGCC GAACCGCGAG GACGAGCGAC TCCTCCGCGA GGTTACTGAG
AACTACTTCG CCGACGCCGC CGGGACGACG ATGCGGCTCG CGACCTGCAT GTTCACCAAT
TCGCCCGACG AGCACTTCAT CCTCGATACG CTCCCCGAGC ACCCACAGGT GGCCGTCGGC
GCGGGCTTCT CGGGCCACGG CTTCAAGTTC GCCAGCGTCA TCGGCGAGAT CCTCGCCGAC
CTCGCGATCG ACGGCGACAC CGACCACCCG GTCGACATGT TCCGGTTCGA TCGGTTCGAC
GTCTGA
|
|---|
| Protein sequence | MVATGTRYDV IVIGVGGMGS ATAAHLADRG SDVLGLERYD VPNTMGSSHG ITRIIRRAYY
EHPSYIPLVE RAYELWDDLA DETGRDVIHR TGSIDAGPPD NIVFEGSLRS CEEHDIPHEV
LTSAEVAERF PGYDLPEGYK ALYQPDGGFV VPEQAIVGHV ETAQAAGAEV RARERVLEWE
STSDEGVRVE TDRGTYEAEN MVLAAGAWNY KFADVLEDLA VPERQVLGWF QPDRPSTFEP
ENFPVWNLKV PEGRFYGLPI YDVPGFKIGK YHHRDKQVDP DDYEREPNRE DERLLREVTE
NYFADAAGTT MRLATCMFTN SPDEHFILDT LPEHPQVAVG AGFSGHGFKF ASVIGEILAD
LAIDGDTDHP VDMFRFDRFD V
|
|---|
| |