| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_5940 |
|---|
| Symbol | |
|---|
| ID | 8736418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 6351715 |
|---|
| End bp | 6353106 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646506568 |
|---|
| Product | putative transcriptional regulator, GntR family |
|---|
| Protein accession | YP_003397715 |
|---|
| Protein GI | 284047375 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCA GAGAACCGCC CCGTTCCAAC GCCCGCGACA TCGAGCGCTA TGCGGCGCTC
TTCTCGTCGC GCACGCAGGT CATGAAGTCC TCCGCGATGC GCGACATGAT GGCGCTCACG
CAACGGCCCG AGGTGATCTC GCTCGCTGGC GGCCTGCCCG ACACGTCGAC GTTCCCGCCC
GAGACGTACG CGAGCGTGAT GCAGACGGTC GCCGCTGAGG CGTGCGCTCA GGCGCTCCAG
TACGGGCCGA CCGAGGGCAT GGCGGCGGTC AACGACTGCA TCCACCAGGT GATGGCGGCC
GAGGGGATGT CGGTCTCCGA CGAGGAGCTG CTCGTCACGA CGGGCGGTCA GCAGGTGATC
GACCTCGTCT GCAAGACGCT GATCGACCCG GGCGACGTGA TCGTCGCGGA GGCGCCGACC
TATCCGGGCG CCGTCCCGAC CTTCTGCTCC TATCAGGCCG ACGTCGTGCA GATCCCGATG
GACGCCGACG GGATGCGCGT CGACGAGCTG GAGGAGACGC TCGACCGCTT GGAGCGGGAG
GGGCGGCGCC CGAAGTTCAT CTACACGATC CCGACGTTCC AGAACCCGGG CGGCGTGACG
ATGTCGCTGG CGCGGCGCCG GCGGCTGGTG CGAATCGCCC ACGAGCGCGA GCTGCTCGTG
CTGGAGGACA ACCCCTACGG CATGCTGCGC TACGAGGGCG AGCCGCTGCC GCCGCTCTAC
GCGCTCGACG GCGGCGAGTT CGTGATCTAC CTCGGGACCT TCTCGAAGAT CCTCTCGCCG
GGGATCCGCC TCGGCTGGGC GGCGGCGCCC CGGCCGGTGC TGCAGAAGAT GAACATCGGC
AAGCAGGCGG CCGATCTCTG CTCGTCCTCG ATGACGCAGC TGTTCGTCAG CGCCTACTTC
GCCTCCGGCG ACTGGCAGAG ATACGTCCGC TCCCTGCGCG ACGTCTACCG CCGCCGGCGC
GACGCGATGT TCGACGCGCT CGCCGAGCAC TTCCCGCGCG AGGCGCAGTG GACGAGACCC
GAGGGCGGCA TGTTCATCTG GGCGACGCTG CCGGACTACA TCGACACGAC CGACCTGCTC
GCGCGCGCGC TGCGGGAGAA CGTCGCGTTC GTGCCCGGGC GCGGCGCCTA CCTCGACGGC
CGCGGCGGCT CCTCGATGCG GCTGAACTTC TCCGGCGTCG GCGAGGACGA CATCCGCGAG
GGGATCCGCC GGATCGGCGC GGTCGTCGCG GAGCAGGTCG CGCTCTACGG CACGCTGACC
GGGGCCGAGG CGGTCACGGC CGCGCCGACC GCGACAGACG ACGCGACGGA GACTGCGGAC
GAGCAGCTCG CGCGCGTCGT CGAGCTGCCG CGGCGCGACG CCCAGCAGGC GCGCGCCGAG
CGCGACCGCT AG
|
|---|
| Protein sequence | MTRREPPRSN ARDIERYAAL FSSRTQVMKS SAMRDMMALT QRPEVISLAG GLPDTSTFPP
ETYASVMQTV AAEACAQALQ YGPTEGMAAV NDCIHQVMAA EGMSVSDEEL LVTTGGQQVI
DLVCKTLIDP GDVIVAEAPT YPGAVPTFCS YQADVVQIPM DADGMRVDEL EETLDRLERE
GRRPKFIYTI PTFQNPGGVT MSLARRRRLV RIAHERELLV LEDNPYGMLR YEGEPLPPLY
ALDGGEFVIY LGTFSKILSP GIRLGWAAAP RPVLQKMNIG KQAADLCSSS MTQLFVSAYF
ASGDWQRYVR SLRDVYRRRR DAMFDALAEH FPREAQWTRP EGGMFIWATL PDYIDTTDLL
ARALRENVAF VPGRGAYLDG RGGSSMRLNF SGVGEDDIRE GIRRIGAVVA EQVALYGTLT
GAEAVTAAPT ATDDATETAD EQLARVVELP RRDAQQARAE RDR
|
|---|
| |