| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_4971 |
|---|
| Symbol | |
|---|
| ID | 8735437 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 5299695 |
|---|
| End bp | 5300480 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 646505598 |
|---|
| Product | transcriptional regulator, SARP family |
|---|
| Protein accession | YP_003396757 |
|---|
| Protein GI | 284046417 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3629] DNA-binding transcriptional activator of the SARP family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.602293 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.15867 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGGG TCATGGTGCA GGGACGCGCG ACGGCGGCGC CTGCGCAGCA CGAGACGACA
CAGACGCAGA CGCGCGACGA ACCGTTGCGG CTGACGCTGC TCGGCGGCTT CGAGCTGCGG
CACGGCGGCG AGCAGGTCGA GCTGCCCGCC AGCGCGCAGC GGCTCGTCGC GTTCCTGGCG
ATCCGCGCGC GCCCGCTCCA GCGTCTCCAC GTCGCCGGCA GCCTCTGGCT CGACGCGCCG
GAGGAGCGCG CGAACGCCGC GCTGCGGACG GCGCTGTGGC GCAGCCGCCG GCGCGGCTGC
CCGCTCGTCG ACGCGCGCGG ACCGAGCATC GGCCTCGCGC CCGGCGTCGA GGTCGACCTG
CACGCCTCCG CGCGGCTCGC GCGGACGGTG CTGGAGAGCC CGCCCCGGAA GATCGTCGAG
CTGGCCGGTC TCGACCACGT CTGGGCGAAC GGCGAGCTGC TGCCCGACTG GTACGACGAC
TGGGTGCTGA TCGAGCGCGA ACGCCACCGG CAGCTGCGGC TGCACGCGCT GGAGGCGCTG
TGCGAGGCGC TCACCGTCGC GGGCCGGCAC GGCGAGGCGA TCGAGGCGGG GATCGCCGCG
GTCGCGTCCG AGCCGCTGCG CGAGAGCGCC CACCGCGTGC TGATCTGCGT CCATCTCGCG
GAGGGGAACG TCGCCGAGGC GCTGCGCCAG TACCGTCTCT TCGGCGAGCT GCTGCGCGAC
CAGCTCGGGC TCGACCCCTC AGCGCGCCTG CGCGAGCTGA TCGAGCGCGC CGTGACGCTG
CGGTGA
|
|---|
| Protein sequence | MTGVMVQGRA TAAPAQHETT QTQTRDEPLR LTLLGGFELR HGGEQVELPA SAQRLVAFLA
IRARPLQRLH VAGSLWLDAP EERANAALRT ALWRSRRRGC PLVDARGPSI GLAPGVEVDL
HASARLARTV LESPPRKIVE LAGLDHVWAN GELLPDWYDD WVLIERERHR QLRLHALEAL
CEALTVAGRH GEAIEAGIAA VASEPLRESA HRVLICVHLA EGNVAEALRQ YRLFGELLRD
QLGLDPSARL RELIERAVTL R
|
|---|
| |