Gene Cwoe_4918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_4918 
Symbol 
ID8735384 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp5244509 
End bp5245828 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content76% 
IMG OID646505546 
ProductD-alanine--D-alanine ligase 
Protein accessionYP_003396705 
Protein GI284046365 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes 
TIGRFAM ID[TIGR01205] D-alanine--D-alanine ligase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.592634 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.181215 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTCC CCTCCGGACA GACCGTCGGC GTCGTCTTCG GCGGCCCCTC GGTCGAGCAC 
GACGTCTCGA TCATCACCGC GCAGCAGGCG ATGGCGGTGC TCTCCGAGCG CCACACGGTG
GTTCCGCTCT ACATCGGCAA GGACGGCCGC TGGTGGACGG GCGAGGAGCT GCGCGACGTG
TCCGCCTTCA CGCAGGCGCC GCCGCGCGGC GCGCGGGCGG TCGAGCTGCG GCTGGGGGCG
GCGGACGGCC CGTTCGTCGA GCCGTCGACG TCGCGCCTGC GCGGCGACAG AGCGCTGGCG
ATCTCCGTCG TGCTGAACGC GATCCACGGG ACCGGCGGTG AGGACGGCGC GCTGCTCGGC
GCGCTGGAGC TGTCCGGTGT ACCGCACGCG GGTCGCGGCG TCGCGGCGTT CGCGGTCGGG
ATGGACAAGC ACCTCGCCAA GACCGTGTTG AGGGAAGCGG GCATCGACGT CCTGCCGCAC
CGCCGGATCG AGCGCGGCGA GTGGGAGCAC GACCGCGCCG CGGTGCTGCG CTCGGTCGCG
GACGAGGTCC CGCTGCCGTG CGTCGTCAAG CCGGCGACGC TCGGCTCCTC GATCGGCGTC
GCGCGCTGCG CCGATCCGGC CGAGGTCGAG GAGGCGCTGG AGCTGGCGTT CGAGCTGGAC
CGCCAGGCGG TCGTCGAGCC GTTCGCGACC GGCGCGACCG AGCTGAACTG CGCGGTGCTG
GGGCGGCCCG GCGGCGAGCT GCGGGTCTCC GAGGTCGAGC GGCCGCTCGG CGGCGAGGCC
GGCCTGACGT TCGAGGACAA GTACCTCAGC AGCGGTGGCG GCAAGGGCGG CACCGGCGGC
GGCGCGAAGG GCGGCGGCGC GAAGGCGGCC GGCGAGGGCG CGGCCGGCGG CAGCAAGGCT
GCCGGCGGCG GCGGTGCGGG CGGCGCCGGC GGCGGCGCGA AGGGGGGCGA CGGTGACCGC
GCGGGCGGCG GCATGGCCGC GCAGGGTCGC GTGATCCCGG CCGACATCGC GCCGGAGCTG
CGCGAGCGCG TGCGCGCCGA GGCGGCGAAG GCCCATCGTG CGCTGCGCGT CGCCGGCGTG
GTGCGCTACG ACTTCTTCGT GCTGCCGGAC CCCGACGGCG GCGCCGAGCG CATCTGCGTC
AACGAGCCGA ACACGGTCCC CGGCTCGTTC GCCTTCTACC TGTTCGAACC CGAGGGGCTC
GCGTTTCCCG ACCTGCTCGA CGAGCTGCTC GCGATCGGGC TCGCCGAGGC GCGCGAGGAG
CGCTTGACGA CGCGCAGCTT CGCGTCGGCC CTGATCGACC GCCACGCATC GGCGGCGTGA
 
Protein sequence
MPLPSGQTVG VVFGGPSVEH DVSIITAQQA MAVLSERHTV VPLYIGKDGR WWTGEELRDV 
SAFTQAPPRG ARAVELRLGA ADGPFVEPST SRLRGDRALA ISVVLNAIHG TGGEDGALLG
ALELSGVPHA GRGVAAFAVG MDKHLAKTVL REAGIDVLPH RRIERGEWEH DRAAVLRSVA
DEVPLPCVVK PATLGSSIGV ARCADPAEVE EALELAFELD RQAVVEPFAT GATELNCAVL
GRPGGELRVS EVERPLGGEA GLTFEDKYLS SGGGKGGTGG GAKGGGAKAA GEGAAGGSKA
AGGGGAGGAG GGAKGGDGDR AGGGMAAQGR VIPADIAPEL RERVRAEAAK AHRALRVAGV
VRYDFFVLPD PDGGAERICV NEPNTVPGSF AFYLFEPEGL AFPDLLDELL AIGLAEAREE
RLTTRSFASA LIDRHASAA