| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_4786 |
|---|
| Symbol | |
|---|
| ID | 8735252 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 5107874 |
|---|
| End bp | 5108662 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 646505415 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_003396574 |
|---|
| Protein GI | 284046234 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0318564 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGCTC GCTTCCAGGA CAAGGTCGCG CTCGTCGTCG GCGGGACGCT CGGGATCGGG
CTGGCGGCGG CCGAGCGGCT GGCCGCCGAG GGCGCCTCGG TGGTGGTCGG CGGGCACGAC
GCGGCGTCGG TCGAGGCAGC GCTCGCCATG CTCCCGCCCG GCTCGCAGGG GCTGGCGGGC
GACGTGCGCG AGGCATCCCA CGCGGCGGCG CTCGTCGAGC GGGCGGTCTC GGCGTTCGGC
GGGCTCGACG TGCTCGTCTA CTCGGCCGGC GTGCAGCGCT ACGGCACCGT CGAGACGACC
ACCGCGGAGG AGTGGGCGGA GGTCTTCGGC GTCAACGTCG GCGGCATCCA CCTCGTCGCG
CAGCGGGCGA TCCCCGCGCT GCGCGCGCGG GGCGGCGGCG CGGTCGTGCT CGTCTCCTCG
ACGCAGGCGA CCGCGTCGCA GACCGACGTC GCCGCCTACA CCGCGTCGAA GGGCGCGATC
AGCGCGCTGA CGCGAGCGAT GGCGCTCGAC CACGCGCCCG ACGGGATCCG CGTCAACGCG
GTCGCGCCCG GTTCGGTCGA CACGCCGATG CTGCGCTGGG CGGCCGACCT CTTCAAGGGC
GACGCTTCCG CCGAGGAGGT CGTCGCGGAG TGGGGGAGGA TGCACCCGCT CGGCCGCGTC
GCGACGCCCG CGGAGGTCGC CGCCGCGATC GCCTTCCTCG CCGGCGACGA CGCGCGCTTC
GTGACGGGCT CGGAGCTGCG CGTCGACGGC GGGCTGTTGG CGGCGCTGCC GGTGGGCCTG
CCGAGATGA
|
|---|
| Protein sequence | MTARFQDKVA LVVGGTLGIG LAAAERLAAE GASVVVGGHD AASVEAALAM LPPGSQGLAG
DVREASHAAA LVERAVSAFG GLDVLVYSAG VQRYGTVETT TAEEWAEVFG VNVGGIHLVA
QRAIPALRAR GGGAVVLVSS TQATASQTDV AAYTASKGAI SALTRAMALD HAPDGIRVNA
VAPGSVDTPM LRWAADLFKG DASAEEVVAE WGRMHPLGRV ATPAEVAAAI AFLAGDDARF
VTGSELRVDG GLLAALPVGL PR
|
|---|
| |