| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_4277 |
|---|
| Symbol | |
|---|
| ID | 8734739 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 4551603 |
|---|
| End bp | 4552475 |
|---|
| Gene Length | 873 bp |
|---|
| Protein Length | 290 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646504903 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_003396066 |
|---|
| Protein GI | 284045726 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.698078 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCG AACGCCGCTT CCACCGCCGC CAGCTGACGC CGTGGCTGTT CGCCCTCCCG
GGCCTGCTGT GGCTCGTCGT CTTCTTCGCG ATCCCGCTCG CCAACCAGCT CAACGTCTCG
CTGATGACCG GCGACGCGGA GGCCGGCTAC ACGCTGACGT GGTCGTTCTC GACCTACTGG
GACGCGCTCT CGGAGTACCA CGTGCAGTTC CTGCGCTCGA TCGGCTACGC CGCCGCGGCG
ACCGCGATCT GCCTCGTGCT GGCGTTCCCG CTCGCCTACT TCCTCGCGTT CAGAGCGAGA
CGCACGAAGG CGCTTCTGCT GCTGCTCGTC GTGCTGCCGT TCTTCGTCTC CTACGTGCTG
CGGACGGTCG CCTGGCAGCT GATCCTGGCC GACAACGGCT GGGTCGTGTC GCGCCTGCAG
GACGTCGGCC TCGTCGCCGA CGACGGCCGC GTGCTGGCGA CCTCGGCCGC CGTGATCGCC
GGCATCGCCT ACAACTTCCT GCCGTTCATG ATCCTGCCGC TGTACGTCTC GCTGTCGAAG
CTGGACCGGC GGCTGATCGA GGCGGCGACC GACCTCTACG CCTCGCGCAC GAGAGCGTTC
CGCAAGGTCA CGATCCCGCT CGCGCTGCCG GGGATCTTCG CCGGCTCGCT GCTGTGCTTC
ATCCCGGCGT GCGGCGACTT CGTCAACGCG GCGTTGCTCG GCACCTCGCG CCAGTACATG
ATCGGCAACG TGATCCAGTC GAAGTTCATC ACCGTGCTCG ACTACCCGAC GGCGGCAGCG
CTGTCGTTCA TCCTGATGGG GCTGATCCTC GCCGGCATCG CGCTCTACAC GCGCCTGCTC
GGCACCAAGA ACCTGACGGA GGTGGCGGTC TGA
|
|---|
| Protein sequence | MRRERRFHRR QLTPWLFALP GLLWLVVFFA IPLANQLNVS LMTGDAEAGY TLTWSFSTYW
DALSEYHVQF LRSIGYAAAA TAICLVLAFP LAYFLAFRAR RTKALLLLLV VLPFFVSYVL
RTVAWQLILA DNGWVVSRLQ DVGLVADDGR VLATSAAVIA GIAYNFLPFM ILPLYVSLSK
LDRRLIEAAT DLYASRTRAF RKVTIPLALP GIFAGSLLCF IPACGDFVNA ALLGTSRQYM
IGNVIQSKFI TVLDYPTAAA LSFILMGLIL AGIALYTRLL GTKNLTEVAV
|
|---|
| |