| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_3934 |
|---|
| Symbol | |
|---|
| ID | 8734391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 4174306 |
|---|
| End bp | 4175931 |
|---|
| Gene Length | 1626 bp |
|---|
| Protein Length | 541 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 646504558 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_003395726 |
|---|
| Protein GI | 284045386 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | [TIGR03208] cyclohexanecarboxylate-CoA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGTCG TCGTCACCAG GCGCTCGCCG CAGGCGGCGC GCTACCGGGC CGAGGGGCTG
TGGGAGGACC GCCTGATCGA CGGGCTGCTG CTCGACGCGG CGGCCGCGTT CCCCGAGCGG
GTCGCGCTCG TGGACGGCGA ACGGCGTGTG ACGTACGGCG AGCTGGCGGC GCGCGTGGAG
CGCGCCGTCG GCGGGCTGCA CGCGCTCGGC GTCCGCCGCG GCGAGGTCGT CTCGTTCCAG
CTGCCGAACT GGCTGGAGGC CGCCGTCGTC CACCACGCGA CGCTGCGGCT CGGCGCCGTC
TCCAACCCCG TGATCCCGAT CTACCGCGGG CGCGAGGTGC GCTTCATCCT GCGCCAGGCG
CGCTCGCGCG TGCTGGTCGT ACCGGACGTC TTCCGCGGCT TCGACCACCG CGCGATGGCG
GCGCGGCTGC GCGACGAGCT GCCCGACCTG GAGCACGTCG TGGTGGTCGG CGAGCCGGGG
CCGGGGACGG TGCGCTTCGA CGACGCGCTG GGGGCCGGCG CGTCCGTCCC CGTCGCGCCG
CCCGTCACGC GCTCGCCGGC GGATCCCGCG CTGCTGCTCT ACACCTCCGG CACCGAGGCC
GACCCGAAGG GCGTCGTCCA CTCGCACGAG ACCGCCGTCT ACGAGAGCCG CTCGATCGCC
GCGCTGTACG AGCTGACTGC GGCCGACCGC GTGCTGATGC CGTCGCCGGT CACGCACATC
ACGGGCCTGA TCTACGGCTT GCAGCTGCCG TTCATGCTCG GCACGCGCGT CGTGCTGCAG
GACGTCTGGA ACGCCGAGCG AGCGCTGGAG CTGATCGAGC GCGAGCGCTG CTCGGTCGTG
ATCGGCGCGA CGCCGTTCCT GCACGGCCTC GCGACGTCGC CGGAGCTTCC GCGTCGCGAC
GTCTCCTCGC TGCGCGTCTT CGGCTGCGGT GGCGCCGACG TGCCGCCGGA GCTGATCCGC
TCCGCCAGCC GCGCGCTCGG GATCCGCGCG TCGCGCCTCT ACGGCTCGAC CGAGTGCCCG
GCCGTGACGG GCAGCGCGCT GCGCGCGCCC GAGCGCTGCC ACGCGGAGAC CGACGGCGCG
CCGATCGGCG GCGGGGAGGC GCGCGTGGTC TCCGAGGAGG ACGCCGGCGT GGTGCTGCGC
GAGCCGGGCG CGCGCGGCCT CTTGCAGGTG CGCGGGCCGG AGCTGTGCCT CGGCTACCTC
GACCCGGCGC TCGACGACGC CGCGTTCGAC GCCGACGGCT GGTTCGCGAC CGGCGACATC
GCGACGATCG ACGCCGACGG CTGCGTGCTG ATCGCCGGCC GCGCGAAGGA CGTGATCGTC
CGCGGTGGCG AGAACATCAG CGCGAAGGAG GTCGAGGACC TGCTGTTCGA GCACCCGGCC
GTGCGCGAGG TCGCGGTCGT CGGCTACCCC GACGCGGTGC TCGGCGAGCG CGCCTGCGCG
TTCGTCGTCG CGGACGGCCA GCTCACCCTC GACACGCTCA TCGCGTTCCT GCGCGCCCGC
GAGGTCGCCA ACCAGAAGCT GCCCGAGCGG CTGCGCGTGG TCGAGGAGCT GCCGAAGACG
TCGAGCGGGA AGGTGCAGAA GTTCCGGCTC CGCGCCTCGC TTCGCGAAGA GGAGGCGGTC
GCGTGA
|
|---|
| Protein sequence | MAVVVTRRSP QAARYRAEGL WEDRLIDGLL LDAAAAFPER VALVDGERRV TYGELAARVE
RAVGGLHALG VRRGEVVSFQ LPNWLEAAVV HHATLRLGAV SNPVIPIYRG REVRFILRQA
RSRVLVVPDV FRGFDHRAMA ARLRDELPDL EHVVVVGEPG PGTVRFDDAL GAGASVPVAP
PVTRSPADPA LLLYTSGTEA DPKGVVHSHE TAVYESRSIA ALYELTAADR VLMPSPVTHI
TGLIYGLQLP FMLGTRVVLQ DVWNAERALE LIERERCSVV IGATPFLHGL ATSPELPRRD
VSSLRVFGCG GADVPPELIR SASRALGIRA SRLYGSTECP AVTGSALRAP ERCHAETDGA
PIGGGEARVV SEEDAGVVLR EPGARGLLQV RGPELCLGYL DPALDDAAFD ADGWFATGDI
ATIDADGCVL IAGRAKDVIV RGGENISAKE VEDLLFEHPA VREVAVVGYP DAVLGERACA
FVVADGQLTL DTLIAFLRAR EVANQKLPER LRVVEELPKT SSGKVQKFRL RASLREEEAV
A
|
|---|
| |