Gene Cwoe_3888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCwoe_3888 
Symbol 
ID8734343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameConexibacter woesei DSM 14684 
KingdomBacteria 
Replicon accessionNC_013739 
Strand
Start bp4128432 
End bp4129961 
Gene Length1530 bp 
Protein Length509 aa 
Translation table11 
GC content74% 
IMG OID646504510 
ProductABC transporter related protein 
Protein accessionYP_003395680 
Protein GI284045340 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1129] ABC-type sugar transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.011244 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.230872 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG GCGAACGCGA CGGCGACGCG CCGCTCGTGC GCCTGCGCGG GATCGACAAG 
TCGTTCCCGG GCGTCCAGGC GCTCGCGGGC GTCGACCTGA CGATCGCGCG CGGCGAGGTG
CACGCGCTGA CCGGCGAGAA CGGCTCCGGC AAGTCGACGC TGGCGAAGAT CGTCGCGGGC
GTCGCGCAGC CGGACGCCGG CACGATCGAG CTGGACGGCG TCCAGTGCAC GATCGCCAGC
CCGGCGGCGG CGCTGCGCCG CGGCGTCGTG CTGATCAGCC AGGAGCTGAC GCTCGCGCCG
ACGCTGTCGG TCGCCGAGAA CGTCTACCTC GGCCGCCTGC CGCGCACCCG CCTCGGCCTC
GTCGACTGGC GCGCCGTGCA CCGCCACGCG CGCGCCGTGC TCGACCGCCT GGAGGTGCAC
GTCGACACCC GCCGGCTCGT CGGCGAGCTG AGCGTCGAGC TGCAGCAGGA GGTCGAGATC
GCCCGCGCGA TGTCGTCCGA CGCACGGCTG CTGATCCTCG ACGAGGCGAC CAGCTCGCTG
TCGGAGTCGG CCACCGCGCG GCTGCTGGAG CTGGTCAGGC AGCGCCGCGA CGAGGGCGTC
GCCGTGCTGA CGATCTCCCA CCGCATGCCC GAGCTGTACG CCGTCGCCTC GGTCGCGACC
GTGCTGCGCG ACGGCAGGCT CGTCGACAGC GTGCCGCTGC CGGCGACGCC CGAGCCGCAG
CTCGTGCGGC TGATGGTCGG CCGCGAGCTG GGCGACTACT ACGGCAAGCG CCGGATCGCC
CGCGGCGATG TCGTGCTGGA GCTGGACGGC GTCGCGACCC CCGACGGCAA GCTGAGACCG
ACCTCGTTCC AACTGCGGCG CGGCGAGATC CTCGGCGTCG CCGGCCTCGT CGGCTCCGGC
AAGGGCGAGC TGGCGCAGGC GCTCGGCGGC GCGATCCCGT CCAGCGGGAG CGTCCGCGTC
GCCGGCCGCG AGGTGTCCGT GCGCGATCCG CGCTCGGCGC TCGCGGGCGG GATCGGCTTC
GTCCCCGACG ACCGCAAGCG CGCCGCGCTG CTGCCGACGC GCTCGGTCGC GGAGAACTTC
TCGATCGCGT GGGGCGACCT GTCGCGCCGC GGCGTGCTCG ACGTGCGCGG CGAGCGCAGA
CGCGTGCGCG ACGCGATCGA GCGCTACGGC GTCGTGACGA CGTCCGCGCA GCAGCTGATC
ACGACCCTGT CGGGCGGCAA CCAGCAGAAG GTCGTGCTCG GCCGCGTCTT CGCGCTCGGC
CTCGACGTGC TCGTGCTCGG CGAGCCGACG CGCGGCATCG ACGTCGGCGC CAAGACGGAG
GTCTACCGGC TGATGCAGGA GGCGACCGAC GCCGGAGCAG GCGTGCTCGT CGTCTCCTCC
GAGCTGCCCG AGCTGCTCGG CATCGCCGAC CGCATCCTCG TCTTCTTCGG CGGCGAGGTC
CGCGCCGAGT TCGACGCGGA GGGGCTGGAG GAGGAGGTGA TCGCGCACGT CGCGGTCTCC
GGCGCACCAC TGGAGCAGCA GGCCGCATGA
 
Protein sequence
MSDGERDGDA PLVRLRGIDK SFPGVQALAG VDLTIARGEV HALTGENGSG KSTLAKIVAG 
VAQPDAGTIE LDGVQCTIAS PAAALRRGVV LISQELTLAP TLSVAENVYL GRLPRTRLGL
VDWRAVHRHA RAVLDRLEVH VDTRRLVGEL SVELQQEVEI ARAMSSDARL LILDEATSSL
SESATARLLE LVRQRRDEGV AVLTISHRMP ELYAVASVAT VLRDGRLVDS VPLPATPEPQ
LVRLMVGREL GDYYGKRRIA RGDVVLELDG VATPDGKLRP TSFQLRRGEI LGVAGLVGSG
KGELAQALGG AIPSSGSVRV AGREVSVRDP RSALAGGIGF VPDDRKRAAL LPTRSVAENF
SIAWGDLSRR GVLDVRGERR RVRDAIERYG VVTTSAQQLI TTLSGGNQQK VVLGRVFALG
LDVLVLGEPT RGIDVGAKTE VYRLMQEATD AGAGVLVVSS ELPELLGIAD RILVFFGGEV
RAEFDAEGLE EEVIAHVAVS GAPLEQQAA