| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_2490 |
|---|
| Symbol | |
|---|
| ID | 8732933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | - |
|---|
| Start bp | 2647038 |
|---|
| End bp | 2648453 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 78% |
|---|
| IMG OID | 646503105 |
|---|
| Product | transcriptional regulator, GntR family with aminotransferase domain |
|---|
| Protein accession | YP_003394287 |
|---|
| Protein GI | 284043947 |
|---|
| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
|---|
| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0316891 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.100941 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGGATC CTCAGTCCAC TTCAGGCCCG GAGCTGCTGC TCCCGCTCGA CCGCGCGCCC
GGCGCGCCGC CGCTGCACGC CCAGCTGGAG GAGGCGCTGC GCGAGGCGGT CCGCGGCGGC
ACGCTCGCAC CGGGCACCCG CCTGCCGGCG TCGCGCGTGC TCGCGGCCGA CGTCGGCGTC
TCGCGCCAGC TCGTCGTCGA GGCGTACACG CAGCTCGTCG CCGAGGGCTA CCTCGAGGCC
CGCCGCGGAT CGGGCACGCG GGTCGCCGCG ACGAGCCCCT CCCTCGAGGA CACCCCACCG
CCGCCCGGCC CCACGCCTCC CCCGCCGCGC TTCGACTTCC GCCCCGGCCT GCCCGACCTC
GGCGCCTTCC CGCGCACGGC GTGGCGACGG GTGCTCGTGC GGGCGCTGCG CGACGCGCCG
GCGGCGGCGT TCGGCTACCC CGACCCGCAG GGCGAGCCCG CACTCCGCGC GACGCTCGCC
GGCTACCTGC GACGTGTCCG CGGCGTCGCC GCCGCACCAG AGCGGATCGT GATCTGCGGC
GGCTTCGCAC AGGCGCTCGG ACTGCTCGGC GCGGCCCTGC GCGAGCGCGG CGAGACGGTC
GTCGCGCTCG AAGACCCCGG CGTGGTCGAC CGCGACGCGA TGCTCGCGCG CAGCGGGCTC
GCGACGGTCC CGGTGCCGGT CGACGCCGAC GGCCTGCGGA TCGACGCGCT CGCGCGGACG
ACCGCCCGCG CCGTCGTCAC GACGCCGACG CACCAGTTCC CGCTCGGCGT CGCGCTCGCG
CCGGCGCGCC GTGCGCGGCT GCTCGACTGG GCGCGTGAGC ATCGCCTCGT GATCGAGGAC
GACTACGACG CCGAGTTCCG CTACGACCGC ACGCCGGTCG GCGCGTTGCA GGGGCTTGCG
CCCGAGCACG TCGCCTACGT CGGCTCCGCC TCCAAGACGC TGGCGCCGGC GCTGCGGCTC
GGCTGGATCG TCGCGCCCGC GGCGCTCGTG CCGGCGCTCG TCGAGGCCAA GCGGCTCGCC
GACCGCGGCA CGCCGGCGCT CGACCAGCTC GCCCTCAGCG AGCTGATCGA CAGCGGCGGC
TACGACCGGC ACCTGCGCCA GCTGCGGCGC CGCTACCGCG AGCGCCGCAC GGCGCTCGCG
ACGGCGCTCG CACAGGCGGC GCCGGCGATC GAGCTGACCG GGATGGACGC TGGCCTCCAC
GCCGTCGCCC ACCTCCCCCG CGGGACCTCC GCCGCGGCGG TCGACGCGCT GCTCGCCGCC
GCCGCGCGCG ACGGTGTCGC CGCGCATCCG CTCGCCCGCT ACCACGCCGA CCCGAGCGCG
GCCCCACCCG CGCTCGTGCT CGGCTACGCA CAGCTCAGCA CCGAGGCGAT CGCCGAGGGC
GTCGCCCGGC TCGCTGCGAC AGCGCGCGGG ATCTGA
|
|---|
| Protein sequence | MPDPQSTSGP ELLLPLDRAP GAPPLHAQLE EALREAVRGG TLAPGTRLPA SRVLAADVGV
SRQLVVEAYT QLVAEGYLEA RRGSGTRVAA TSPSLEDTPP PPGPTPPPPR FDFRPGLPDL
GAFPRTAWRR VLVRALRDAP AAAFGYPDPQ GEPALRATLA GYLRRVRGVA AAPERIVICG
GFAQALGLLG AALRERGETV VALEDPGVVD RDAMLARSGL ATVPVPVDAD GLRIDALART
TARAVVTTPT HQFPLGVALA PARRARLLDW AREHRLVIED DYDAEFRYDR TPVGALQGLA
PEHVAYVGSA SKTLAPALRL GWIVAPAALV PALVEAKRLA DRGTPALDQL ALSELIDSGG
YDRHLRQLRR RYRERRTALA TALAQAAPAI ELTGMDAGLH AVAHLPRGTS AAAVDALLAA
AARDGVAAHP LARYHADPSA APPALVLGYA QLSTEAIAEG VARLAATARG I
|
|---|
| |