| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cwoe_1759 |
|---|
| Symbol | |
|---|
| ID | 8732199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Conexibacter woesei DSM 14684 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013739 |
|---|
| Strand | + |
|---|
| Start bp | 1855271 |
|---|
| End bp | 1856785 |
|---|
| Gene Length | 1515 bp |
|---|
| Protein Length | 504 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 646502376 |
|---|
| Product | integrase family protein |
|---|
| Protein accession | YP_003393561 |
|---|
| Protein GI | 284043221 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.369791 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0979902 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCAGGC AGCCGACCGG CGAGGTCCGG ATCTACACGC GCGCGGATGG CGGCGTCACC
TACTACGCGC GCTTCCGCGC GCTCGGCAGA CGTTGGAGAG TGAAGCTCGG CACCGACATC
GAGGGCTGGA ACGAGACCCG CGCGGAGAAC GCGGTCGGCG CGATCGTCGA CCGTGTCCGC
CGCGGCACGT GGACGCCGCC GAGCGCGTCG CGGGCGACCG AGCACGAGGA CCCGACGTTC
CACGCATTCG CCTCGCAGTG GTTCGTGCGC AAGTCGCGCG GGTTGAGCGC GCGCACGGTC
GAGGACTACG AGTGGCGGCT GTCGAACCAT CTGCTGCCGT ACTTCGCGCG CCACCGCCTC
TCCGAGCTCG ACGTGCGCGC CGTCGACGGC TACCGCGCCG CGAAGCTGGC CGAGCGCGAC
GAGGCGCGCG CTGCCGGCCG GCGCGCGCTC TCCAACGACA GCATCAACGC GACGATCGGG
CTGCTCGCGC AGATCCTCGA CGAGGCCGCC GAGCACAAGC TCCCGGTCGA GCGACCGAAC
CCGGCGAAGG GCCGCCGGCG GCGGCTCAAG ACCCAGCGCG GGCAGCGCTC GTTCCTGGAG
CCCGACCAGG CGGCCGCGCT GCTCGACGCC GCCGGCAGGC TCGACGCCTC CGGCCCGCTC
GACTGGGAGA CGGTCTGCGC GATCCGTGCC TCGGCGGAGT CGAACGTCGC GCTGGCGCGG
CGCCACGGCG TCAGCGACTC GCTCGTCTCG CGCGTGCGCC GCGGTCTGGT CTGGCGGACG
CCGGCGAGCG CGCCGGCGCG CCGGCCGGTC GTCGCGACGC TGCTGCTGGC CGGCCCGCGC
GTCGCCGAGC TGTGCGCGCT CGACGTCGCC GACGTCGACC TGGAGTACCG GCGGCTGCGG
ATCCGCGACG CGAAGACCGC GGCCGGCCGC CGGCAGATCG TCGTGAGCGA CCTGCTCGCC
GCCGAGCTGG CGCCGCACAT CGCGCGTTCG GCGGGCGCCG GCGGCGCGGC GGGCGCCGGC
GCCGTACACG CCGTTGGCGC GGCGGCCGCC CCCGCCGCGC CCGCTGACCC TGCCCGCCCG
CTGTTCGCCA ACACGCGCGG GGAGCGCTAC ACGCCGTCGG GGATCCGCAC CGCGGTGCTC
GCGCCGGCGG TCGCGCTGGC GTCGCGCACG ACCCACGGGC TGCCGGCGGT GACGCCGCAC
ACGCTGCGAC GCACGTTCAT CTCGCTGCTG CTCGCGGGCG GCGCCGACGT GCCGTGGGTG
ATGGCGCAGG TCGGCCACAC CGACCCGAAG GTCACGCTGC AGATCTACGC GCAGGTCGTG
CAGTCCCAGC AGCGCGACTA CGGCGCGCGC GTCGACCGGA TGATCGGCGG CGCGGCGGCG
TTCGGGACCG GGAACGGGAC CACGCGCGCC GCAGCGTCCG TCGCCGCAGA CCGCGACGCA
GCTCCTCGAC CCGCCGCGAT CCCCGTCACC ACGGCGATTC CGCCGGCAAG CCCGAGAGGG
GACTCGAACC CCTGA
|
|---|
| Protein sequence | MPRQPTGEVR IYTRADGGVT YYARFRALGR RWRVKLGTDI EGWNETRAEN AVGAIVDRVR
RGTWTPPSAS RATEHEDPTF HAFASQWFVR KSRGLSARTV EDYEWRLSNH LLPYFARHRL
SELDVRAVDG YRAAKLAERD EARAAGRRAL SNDSINATIG LLAQILDEAA EHKLPVERPN
PAKGRRRRLK TQRGQRSFLE PDQAAALLDA AGRLDASGPL DWETVCAIRA SAESNVALAR
RHGVSDSLVS RVRRGLVWRT PASAPARRPV VATLLLAGPR VAELCALDVA DVDLEYRRLR
IRDAKTAAGR RQIVVSDLLA AELAPHIARS AGAGGAAGAG AVHAVGAAAA PAAPADPARP
LFANTRGERY TPSGIRTAVL APAVALASRT THGLPAVTPH TLRRTFISLL LAGGADVPWV
MAQVGHTDPK VTLQIYAQVV QSQQRDYGAR VDRMIGGAAA FGTGNGTTRA AASVAADRDA
APRPAAIPVT TAIPPASPRG DSNP
|
|---|
| |