Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cwoe_1439 |
Symbol | |
ID | 8731879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Conexibacter woesei DSM 14684 |
Kingdom | Bacteria |
Replicon accession | NC_013739 |
Strand | + |
Start bp | 1514509 |
End bp | 1516041 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 646502057 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003393242 |
Protein GI | 284042902 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00616643 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACGGCGG GCTACATTCA TGATGAGCAG AAGGTCGGCG AGCACCAAGA GGGGGATCCC TTGCAGGCAC GGCGCACGAT GACGGCGGTC TCCGCGACGC CGTACGAGCA GCACCGCGGG TACGTGCTCG CCGTGCTTGC GCGGCGTTGT GGCTGGCTCG ACGCGTCCGA GCGCGAGGAG ATCCTGCACG ACGCCTACGC CGTCTTCCTC GAGAAGCAGC GCGACGGCCA GCTCGACCGC GACGCGATGC GCCCGCAGCA GGTGCGCGCC TATCTGACCC AGACCGCGCT CAACAAGGCG CTCGACGAGG GCAAGCGCGC GCGACGCAGA ACGTCGGTCG AGCTGGACGA AGGGCTCGAG GTCGCGGCCG GCGAGCCGAC CGCTGACGAA CTGCTGAGCG AGAGCTGGGA CGGCGCGCGG CTGCGCGAGA TCGTCGCCGA GCTGCCCGAG CGCCAGCAGG CGATCGTCAA GTTGCGCTTC TTCTTCGACC GCACGCCGGA GGAGATCCAG CGCTACCTCG GCGTCACCGA GCGGGTCTAC CGCCGCGAGC TGGAGCGCGC GATGCGGCTC GTCGCGACGC GCTTCGAGCT CGTTCGCGAA GGGACGTTCT GCGAGAGCCG GCGCAGCCTG ATCCTCGCGT TCGTCGCTGG GATCGCAGGG CCCAACCGGA CCGCCGACGC GCGCCGGCAC CTCGCGAGCT GCTCCGGCTG CGCGCGCTGG GCCGTCGAGC TGCACGAGAA CGCGCGCCAG GTCGGCGCCG CGGTCCCGAT CCCGGTCCTC GCCGTGCACC TGTCCGGTCG CGGCGAGTGG CTGGCGACGG CGGGACGGAC GCTCGACGGG ATGCGCGAGC GCGTCGCCGA GCTGCTGGGC GGCGCGCGCG ACGCGGCCAC GAGCGCGATG GTGCGGGCCG ATCCGGCGTC GGGCTCGCTG CTGGCGGGCG CCCGGCCGGG CGCCGTCGTC GCGGTCGCCG CAGGCTGCCT GACGCTCGGG TCGACGGCGA CGTACTGCGC CGTCGAAGGG ATTCCGCGAC CGCTGCGCGC GCTCGTCGGC GCGGCGCCGG AGAGCACCCG GGCGGCCGAG CGGCCGGCGC CGAGACGCGC TGCCGCGTCG TCGTCGGCGG CGAGAACCGC GCCGGCGGCG CTGGCGCCCG CGCCGGGGTG GGCGAGACCG GCGGCGAAAC CGGCGCGCAC GACGCCGCAG GCGCTCGCGC CGTCGGGCCG CCCGCAGCCG ACGACCAGAC GCCCCGCGCA GCCGCGTGCC ACGCAGGCCG AGCGCAGACA GGCCGCGGCG AAGCGGCAGG AACGCGCGAC ATCGTCGGAG TTCGGCGTCG AGGGCGGCGG GACGGCGGGC GGCGGCGGCA CGAGCGGCGG CACGGGTGGA GGCAGCACGC CGCCCGCCGC GAGCAGCGGC TCCTCCGGCG CCCCGCCCGC TTCGTCGGGC GGATCCGGCG GAACCGGCTC GACCGGCGGG GGCTCCGGCA GCGGCACGCC GTCCGGCGAG GGCGGCAGAT GGGGCTCGGA GTTCGGTCCG TGA
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Protein sequence | MTAGYIHDEQ KVGEHQEGDP LQARRTMTAV SATPYEQHRG YVLAVLARRC GWLDASEREE ILHDAYAVFL EKQRDGQLDR DAMRPQQVRA YLTQTALNKA LDEGKRARRR TSVELDEGLE VAAGEPTADE LLSESWDGAR LREIVAELPE RQQAIVKLRF FFDRTPEEIQ RYLGVTERVY RRELERAMRL VATRFELVRE GTFCESRRSL ILAFVAGIAG PNRTADARRH LASCSGCARW AVELHENARQ VGAAVPIPVL AVHLSGRGEW LATAGRTLDG MRERVAELLG GARDAATSAM VRADPASGSL LAGARPGAVV AVAAGCLTLG STATYCAVEG IPRPLRALVG AAPESTRAAE RPAPRRAAAS SSAARTAPAA LAPAPGWARP AAKPARTTPQ ALAPSGRPQP TTRRPAQPRA TQAERRQAAA KRQERATSSE FGVEGGGTAG GGGTSGGTGG GSTPPAASSG SSGAPPASSG GSGGTGSTGG GSGSGTPSGE GGRWGSEFGP
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