| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_7011 |
|---|
| Symbol | |
|---|
| ID | 8716279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013733 |
|---|
| Strand | + |
|---|
| Start bp | 33601 |
|---|
| End bp | 34581 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | |
|---|
| Product | Thioredoxin domain protein |
|---|
| Protein accession | YP_003391753 |
|---|
| Protein GI | 284005935 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 43 |
|---|
| Plasmid unclonability p-value | 0.817681 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.78664 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAGAC ATCTGTTCCT CCGTGGCTTA ATGGTTGGCT TAATTACACT TCTGTATACA
CAAACCGTTT ATGCTATCAC TTTCTTCCAA GGTTCGCTTC AAGAGGCCCA CCAAAAAAGT
AAACAGGAGC ATAAGAGGCT ACTGATCTAC TTTACGGCCA AATGGTGTGG ACCCTGTCGC
TACATGGAGA AGGAAGTATT CAATACTGAT TCAGTCACCC AAATTACCGA CGCCCAATTT
GTGGCCCTCA AAGTAGATTA TGATGCTTGG AACACCAAGC CAATCGTGGA AAAATACCGA
GTAGCTAGCT TGCCTTCGTT TGTTATCGTG GATTCGCTGG ACGCTGTTGA AAAGCGAGCA
CTTGGACGAG TAACGACTGC TGAATTTATC CGTTTCCTGG CTCCGACTAC CGTCCAGGTA
GTTGAACGTC CCATTTTTGA GCTACGAAGT GATGAACAAC GCTATACACA ACGGCAACTC
ATGGAGACAA AGGGGCAACT GGAGCTAGGC CTTCAAGCGG GAGTCAATTT AACTCCCGTA
TCCAGTTTAA CTATTAGTCA CCAATTAGGG TATGACATCA GTCTATTACT AATCTGGACC
AAACGCCGGA TGAGTATTCG ATCTGGATTA AGTTTAGTAT CCATTGGCGC AAAGTCGGAC
GATGGTCAGC CGTTGCGCTT CCACTACGTA GCCTTTCCCG TGAATCTGTC TTACCTACTG
CGTAAAACTG TCGTGTTAGG ACTTCCCGGG GGATATCGAG CGAATCTAAC CCCGTATATC
TGTCGGCTAA TCAATAACCC TGATCTAGCT GTTAGCTCTT TGGATTATGG CACTAAGCTA
GGTCTAAGTG CCTTTGTTGG CAGTACATCC CGGTTGGAAG CTCAACTAGG TTACCAGCTG
GGCATGAAGG ATATTGGTGG GCCTTCCAGC TTCAATCTTT ATAATCGGGG CCTATATTTT
TGCGTCACCT TTATTCTCTG A
|
|---|
| Protein sequence | MLRHLFLRGL MVGLITLLYT QTVYAITFFQ GSLQEAHQKS KQEHKRLLIY FTAKWCGPCR
YMEKEVFNTD SVTQITDAQF VALKVDYDAW NTKPIVEKYR VASLPSFVIV DSLDAVEKRA
LGRVTTAEFI RFLAPTTVQV VERPIFELRS DEQRYTQRQL METKGQLELG LQAGVNLTPV
SSLTISHQLG YDISLLLIWT KRRMSIRSGL SLVSIGAKSD DGQPLRFHYV AFPVNLSYLL
RKTVVLGLPG GYRANLTPYI CRLINNPDLA VSSLDYGTKL GLSAFVGSTS RLEAQLGYQL
GMKDIGGPSS FNLYNRGLYF CVTFIL
|
|---|
| |