| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6989 |
|---|
| Symbol | |
|---|
| ID | 8716257 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013733 |
|---|
| Strand | + |
|---|
| Start bp | 14085 |
|---|
| End bp | 16862 |
|---|
| Gene Length | 2778 bp |
|---|
| Protein Length | 925 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_003391731 |
|---|
| Protein GI | 284005913 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCAC ACATCAAAGA AAAATTACAA AGTTTGAGCT CAAACACTAA TAACATACAG
CTAATTAACG GCAGATTAAA AGAATTCCCT GTCGAACTTA GAAAGTGTGA AAAAATGCGA
ACGCTCGATT TATTTGGAAA CTCGATTCAA AAAATTCCCG ATTGGGTCTA CAGTCTCAAA
AGATTAGAGC ACTTAAGCTT GAGAAACAAT TCTATTAAAG AAGTTCCAAC TATTGTATTT
ACACTTGAAA ACATTAAATA TTTAAATCTA GCAGACAATC AGATTCAAGA TATAAATAGT
AGCAACTTCA CGAATCTAAT GAATATTGAA AAAGTGGATA TTGGTTATAA TGACATAAAA
TTAATTCCAT TTGGACGAAT AGATTATCCA AAATGCAAGA CTCTAGCTAT TCAAGGCAAT
AAATTAGAAG AATTTCCGAG TGCAATCAGT CAAGTTAATA CTCTCGAAAA GCTAGTTATA
TCAGAAAATG AAATTAGTTC TATTGAAGAC GATGCATTTC TTGGACTTGA AAATTTAGAA
GAACTTGATT TAAGCTTCAA TCGACTTACA TACTTACCAT CAAGTCTTGG TAAGCTAACT
AAACTTAAAA AGCTAAATTT AAGTGGGAAT AATATTCGCT CATTGCCCAA AGAATTTGAG
AATCTTGTTT CACTTGAATC CCTCGGTTTA GATGGTAATC CACTTGAAAG AGTACCTTTA
GAAATTTCGG CTCAAGGAGT TTCAGGAATT ATAAACTATC ATCTATCATT AGGTGATAAT
GTTCAACTAT TCGAAGCAAA GCTCTTAATT GTTGGTCAAG GTAATGTTGG CAAAACATTC
TTAATGAATC GTTTAATACA TGATTCTATA CCAGAGACCC AAACGACTGA AGGAATTGAC
ATAAAAACAT GGAAAATTCA GACAAATTCA TCACCTGACT TCAGGGTCAA TATTTGGGAC
TTTGGTGGTC AGGAAATATA CCACTCAACT CATCAGTTTT TTCTTACGAA ACGTTCTCTT
TACTTATTAG TCTGGGAAGC GAGGACGGAC CAGCATCTTA TCAGCTTTGA TTATTGGCTC
AATGTAATTC GCCTTCTAAG CAATAATTCA CCTATAATAA TTGCTTTAAA TAAGATTGAT
GAAAGGATCG CCAATATTGA CGAAAAATCG CTAAAAGCTA AATTCAAAAA TATCGTTGGT
TTTTACCAAG TTAGCGCAAA AAATGGCCAA AATATAGCAC AATTAACCTC AAAAATTTCG
ACTGAAATCA ATACATTACC TTTGATCGGT GATAAGCTTC CGAAAGTATG GCTAGAAATA
AGAACAGAAC TGGAATCCTT AGAATCGAAT TATATCCCAG CTGAAAGGTA TTTAGCCATT
TGTAACCAAC ATGGATTATC TAATAAAAGA GCTCTTTTTC TAAGCCAATA TTTTCATGAC
TTAGGCGTTT TTCTTCATTT TCAGGACGAT ACTCTGCTAA GAAACTTAGT ATTTTTAAAA
CCAGAGTGGG CTACAAATGC GGTTTACAGA ATTCTTGATT CGAAGGATGT TATTAATCGA
GAAGGTGAGT TTGACTCTGA TATGCTAGAT ATCATTCTCA ACGAATTCGA ACGTGATAAA
CGTCCTTACA TAGTTAATTT GATGAAAAAG TTTGAATTGT GTTTCGAAGT ATCAAGAGAC
ACATATCTTA TTCCAGAGCT GCTATCGCCC GAAACACTCG AATTTGATTG GAATTATAGT
AATAATTTAC GTTTCGAATA TCACTATGAT TTTATGCCAG CAGGAATTAT GGCTCGTTTT
ATAGTGAGAA CAAGGAATTT AGTTCACGAT AGAACATTTT GGAAGAATGG AGTTATTATT
CAGAGAGAAA ATACCAGAGC ATTAGTAACT ACTGATCAGT ACTCTAGAAA ACTTTATATA
TGGATTCACG GGCCTAATTC ATCGTTTTTG CTTGAAATTA TTAGAAAAGA GTTAGATGAA
ATTCATATAT CTTTGAATTA CCCTGATGTT CCTGAAAAAA TCCCATGTAT TTGCCAAGAA
TGTGCTAATT CAACAAAGCC ACACTTATTT AACTATTTGT TTGTTAAGAG AGTGGGTCAA
GATAATACTT TTAGGACTAT TCCTTGTGAG GTAAGTGCTA CAGGTGTTAC AGTTCATAAG
CTTCTCGGAC TATACAGAAT AGAAAGTTCT GAATCTGATA ATAATCCAAT ATATTCTCTT
GATAAAATAT TAGAAGATCT TATCGAGGTA AGTTCAAGAA TTCTTGAGCG AAAGTTTCAA
AAGAAAATTG AAGATTTAGT CAATGATGAC ATTGTTGATT TGTTAAGAAC TAAAGGGCAC
AATATTGCAG ATCAAACGAG ATCTGGAGCT TCGGGAAGCG GAAAGGGTGC TGGCGAAATA
GACATTATGA TTAGGAAAAA TAATGGAATC CCAGTCACAA TTATAGAATG TTTCAGACTC
GAAAGTTGTG GTCCAAAAAA CATGGTAGTA GCGGAGCACT TAAAAAAATT ATTAACGAGA
TACGATACTC ATGAGCTCAA GCGAAAATTT GTTATTGTAT TTGGGGAAGC AGAGAGATTT
GACAATCTAT GGATTAATTA TTCTGATTAT ATCAAGAGTA TAAACTCGAA TGATACTTAC
GGCGATAAGT ATCCTCTCTC TGGGTTTAGC GTTAGAGATG ACTTGAATAG TTTTTCTAAT
ATGAAAGTTG GTGTCTCTAG ACATGAGAAT AATGGAGAGA TTATAGAAGT CGTTCATCTT
GTCTTAAACA TGAAATAA
|
|---|
| Protein sequence | MKPHIKEKLQ SLSSNTNNIQ LINGRLKEFP VELRKCEKMR TLDLFGNSIQ KIPDWVYSLK
RLEHLSLRNN SIKEVPTIVF TLENIKYLNL ADNQIQDINS SNFTNLMNIE KVDIGYNDIK
LIPFGRIDYP KCKTLAIQGN KLEEFPSAIS QVNTLEKLVI SENEISSIED DAFLGLENLE
ELDLSFNRLT YLPSSLGKLT KLKKLNLSGN NIRSLPKEFE NLVSLESLGL DGNPLERVPL
EISAQGVSGI INYHLSLGDN VQLFEAKLLI VGQGNVGKTF LMNRLIHDSI PETQTTEGID
IKTWKIQTNS SPDFRVNIWD FGGQEIYHST HQFFLTKRSL YLLVWEARTD QHLISFDYWL
NVIRLLSNNS PIIIALNKID ERIANIDEKS LKAKFKNIVG FYQVSAKNGQ NIAQLTSKIS
TEINTLPLIG DKLPKVWLEI RTELESLESN YIPAERYLAI CNQHGLSNKR ALFLSQYFHD
LGVFLHFQDD TLLRNLVFLK PEWATNAVYR ILDSKDVINR EGEFDSDMLD IILNEFERDK
RPYIVNLMKK FELCFEVSRD TYLIPELLSP ETLEFDWNYS NNLRFEYHYD FMPAGIMARF
IVRTRNLVHD RTFWKNGVII QRENTRALVT TDQYSRKLYI WIHGPNSSFL LEIIRKELDE
IHISLNYPDV PEKIPCICQE CANSTKPHLF NYLFVKRVGQ DNTFRTIPCE VSATGVTVHK
LLGLYRIESS ESDNNPIYSL DKILEDLIEV SSRILERKFQ KKIEDLVNDD IVDLLRTKGH
NIADQTRSGA SGSGKGAGEI DIMIRKNNGI PVTIIECFRL ESCGPKNMVV AEHLKKLLTR
YDTHELKRKF VIVFGEAERF DNLWINYSDY IKSINSNDTY GDKYPLSGFS VRDDLNSFSN
MKVGVSRHEN NGEIIEVVHL VLNMK
|
|---|
| |