Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6834 |
Symbol | |
ID | 8716102 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013732 |
Strand | - |
Start bp | 4316 |
End bp | 4897 |
Gene Length | 582 bp |
Protein Length | 193 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | Exonuclease RNase T and DNA polymerase III |
Protein accession | YP_003391582 |
Protein GI | 284005763 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.00000544485 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 50 |
Fosmid unclonability p-value | 0.0136753 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTACC TAATCATCGA CACCGAAACC AACGGCTTGC CGCAGTCGTA TCACTTACCT GTAACTGACC TGACCAACTG GCCCCGGCTC ATTTCCGTGG CCTGGGGGTT GTATGACGAG GAGGGTAAGG AACTATGCCG ACACTATGCG ATTGTGAAGC CTGATGGCTA CCGCTGGAAC AAGGTAGCGC AACAAATACA CCGCATTACG CCGGAGCAGG CCGAAACGAA AGGGCAGCCA TTAGACGACG TGCTAAATCA GTTATGCCCG GCTATGGAAC GAGCCGATGC CTGGGTAGGA CACAATATAG ATTTGGACTA CGGCGTAATC GGAGCCGAGT TTATACGGGC TGAACAACGG CAACCCGGTC GGGTAGGGGA GTTCCCCGCC CGCCCGGTCC TTTGCACGAT GGATGTCAGC GCGAAGGTAA CGCCCAACCG GGAGCCAGTA CGGTTAGACG AACTGTACCA GTTGCTGACG GGCAAAAAAA TGAAAGGAAT GCACGACGCT TCAGCCGATA TGCTGGCTAC AGTTCGCTGC TTTTTTGGAC TTAAACAACG AGGATACTTT GAAACGTCAT AG
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Protein sequence | MTYLIIDTET NGLPQSYHLP VTDLTNWPRL ISVAWGLYDE EGKELCRHYA IVKPDGYRWN KVAQQIHRIT PEQAETKGQP LDDVLNQLCP AMERADAWVG HNIDLDYGVI GAEFIRAEQR QPGRVGEFPA RPVLCTMDVS AKVTPNREPV RLDELYQLLT GKKMKGMHDA SADMLATVRC FFGLKQRGYF ETS
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