Gene Slin_6834 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6834 
Symbol 
ID8716102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013732 
Strand
Start bp4316 
End bp4897 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content54% 
IMG OID 
ProductExonuclease RNase T and DNA polymerase III 
Protein accessionYP_003391582 
Protein GI284005763 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00000544485 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value0.0136753 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCTACC TAATCATCGA CACCGAAACC AACGGCTTGC CGCAGTCGTA TCACTTACCT 
GTAACTGACC TGACCAACTG GCCCCGGCTC ATTTCCGTGG CCTGGGGGTT GTATGACGAG
GAGGGTAAGG AACTATGCCG ACACTATGCG ATTGTGAAGC CTGATGGCTA CCGCTGGAAC
AAGGTAGCGC AACAAATACA CCGCATTACG CCGGAGCAGG CCGAAACGAA AGGGCAGCCA
TTAGACGACG TGCTAAATCA GTTATGCCCG GCTATGGAAC GAGCCGATGC CTGGGTAGGA
CACAATATAG ATTTGGACTA CGGCGTAATC GGAGCCGAGT TTATACGGGC TGAACAACGG
CAACCCGGTC GGGTAGGGGA GTTCCCCGCC CGCCCGGTCC TTTGCACGAT GGATGTCAGC
GCGAAGGTAA CGCCCAACCG GGAGCCAGTA CGGTTAGACG AACTGTACCA GTTGCTGACG
GGCAAAAAAA TGAAAGGAAT GCACGACGCT TCAGCCGATA TGCTGGCTAC AGTTCGCTGC
TTTTTTGGAC TTAAACAACG AGGATACTTT GAAACGTCAT AG
 
Protein sequence
MTYLIIDTET NGLPQSYHLP VTDLTNWPRL ISVAWGLYDE EGKELCRHYA IVKPDGYRWN 
KVAQQIHRIT PEQAETKGQP LDDVLNQLCP AMERADAWVG HNIDLDYGVI GAEFIRAEQR
QPGRVGEFPA RPVLCTMDVS AKVTPNREPV RLDELYQLLT GKKMKGMHDA SADMLATVRC
FFGLKQRGYF ETS