| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6822 |
|---|
| Symbol | |
|---|
| ID | 8716093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013731 |
|---|
| Strand | + |
|---|
| Start bp | 182772 |
|---|
| End bp | 184097 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | Outer membrane protein-like protein |
|---|
| Protein accession | YP_003391570 |
|---|
| Protein GI | 284005750 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTCGCA TTAACCCCAT ATTAACTCTT TGTCTGTTGC TGACGGGTCA TGGCTACGGT
CAGGCAGTCG TGCAACCGGT ACCGGCTCCC CGGACGGGCC CGAGCGAGAC CGCTCCCGCC
GTGCGACGGA CCGTGCCAGT GCTGCCCCTG GATAGTGTGC TGACCCGGAT TGACGAGCGT
AACCCGCTGC TGAAACCCTA CGGAAGCCGG GCCGCAGCGG CCCGTGCCTA CGCCGAAGGA
GCGCGTAGCT GGATGGCCCC GATGGTGGGC GTAGGTACGT TCATGGCCCC TTATCCGGCG
CAGATGATTA TGGACGAGCG CGACAAGGGC TTTGGCATGG TCTCCGTCGA GCAGGACATT
CCCAACCGGG TCAAGCAGCG GGCCACGCAG GTCTTTCAAC AGTCGAAAGC CGCCGTTGAG
GAGGCCGGTC GGGGCGTAAC GCTCAACCGG CTGCGTTCAG ATGCCAAACA ACTCTATTTT
GATTGGCTCG TGCTGGAAAA ACGGCTGACG GTACTGGAAG AAAACCGGCG TATTCTGCAA
CTGATGAAAA AGCTGGCCGA CATCCGCTAC CCGTACCAGC AGGGCAGCTT AGGTAACATC
TATAAAGCGC AAGGTCGGCT CTACGAGCTG GATAACATGG TGACGATGAC CGAGGCCGAT
ATTGAGCGTA AACGCATTGG ATTGAACACG TTGATGAACC GGCCCACAAC CGAGGCATTT
CAACCGGATA CTACCCTTCG GCCGGCCGAA CCGCAGCAAG CCCTGCCCAC TACGGAAGAC
ATTGGCCAGG TACGTTCCGA CATCCGGCGC ATGGACCGGC AGATTCTGAG TATGCAGGCA
GGCATCGAAG CACAGAAGGC GCAGGCCCGC CCCGACTTTC GCATCCGCTT TGACCACATG
CAGCCGTTTT CGGGGGTCAA GAGCATGATG CCCACCCAGT TTACGCTGAT GGGTATGATT
TCGATTCCGG TTGTACCCTG GGCGTCCCGG ATGTACAAAG CCGAAATTAA AGGCATGCAG
CAGGATATCG AAGCCATGCG CTACGAGCGG GAAGGAATGC TCAATGAAAC GCAGGGTATG
GTCGCCCAGA TGCTGACTGA CATACGGAAC ATGCGAACGC AGGTAGACAA CTACGAACGA
CGGGTAATTC CCACCCTCCG CAAAAATTAC GACACGCAAC TGATTGCCTA CGAACAGAAC
AAAGGCGAGT TACCCGTCGT CATTGATGCC TGGGAAACAC TAAATATGAC GCAGATGGAC
TACCTGACGC GCCTACAGGA CTATTACCGC ATGATTGTGA GCTATGAACG GGAACTGGAG
AAATAA
|
|---|
| Protein sequence | MLRINPILTL CLLLTGHGYG QAVVQPVPAP RTGPSETAPA VRRTVPVLPL DSVLTRIDER
NPLLKPYGSR AAAARAYAEG ARSWMAPMVG VGTFMAPYPA QMIMDERDKG FGMVSVEQDI
PNRVKQRATQ VFQQSKAAVE EAGRGVTLNR LRSDAKQLYF DWLVLEKRLT VLEENRRILQ
LMKKLADIRY PYQQGSLGNI YKAQGRLYEL DNMVTMTEAD IERKRIGLNT LMNRPTTEAF
QPDTTLRPAE PQQALPTTED IGQVRSDIRR MDRQILSMQA GIEAQKAQAR PDFRIRFDHM
QPFSGVKSMM PTQFTLMGMI SIPVVPWASR MYKAEIKGMQ QDIEAMRYER EGMLNETQGM
VAQMLTDIRN MRTQVDNYER RVIPTLRKNY DTQLIAYEQN KGELPVVIDA WETLNMTQMD
YLTRLQDYYR MIVSYERELE K
|
|---|
| |