Gene Slin_6817 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6817 
Symbol 
ID8716077 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp176957 
End bp177736 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391566 
Protein GI284005746 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGAA CCTGGCATCT GCGCATTCGC AAAACCCATC GGTATCTGGG GCTGTTCATT 
GGCGTGCAGT TTTTGCTCTG GACGGTGGGT GGCCTGTATT TCAGCTGGTC AAACCTCAAC
GATATTCACG GTGACCATCT GAAACGGGCC GCGACGGGAT TTCCCGTCTC CCAATCGCTG
GTTTCGCCTT CCGTTCCCAT GAACGCGTTA CGGCAGATGG GCATGACTTC CCTGCTGACG
GTGACCCTGA TCGAGGTACT CAACCGGCCT TTCTACCAGC TAAGCTATCA GATGCAGCAT
GGAAACGGTC ATGTCCTGAC GCACACCCAA CTGGCAGACG CGAAGACCGG TCAATTGCGG
GGTGAGCTAA CGCAAACCGA GGCTACTGCC CTGGCCCGGC AACGATTTAG TGGCCCCTCT
GAGGTTGAGC GGGTTGAGTA CCTGACAACG ACCAACGGGC ACCACGAGTA CCGTGAAAAG
CCGCTGCCCG CCTATGCCAT TACGTTCCGG CAACCGGCCC ACGCGACGGT GTACGTAGCG
GCTCAACTGG GTACGGTGCA AACCGTGCGA ACCGACCCCT GGCGCATTTT TGATGTGCTC
TGGATGCTCC ACACGATGGA CTACGAAGGG CGTGACGATA TTAATAATGG TCTGCTTCGG
GCCTTCTCTA TACTCGGATT GCTGACAATC TCGTCGGGGT TTGCGCTGTA TTTCGTTTCG
TCTCCCCAGT TAAGGCGGAA GCCGAAACAA GGACGAAAAT CGCAACCAAC TGCCTTTTAA
 
Protein sequence
MNRTWHLRIR KTHRYLGLFI GVQFLLWTVG GLYFSWSNLN DIHGDHLKRA ATGFPVSQSL 
VSPSVPMNAL RQMGMTSLLT VTLIEVLNRP FYQLSYQMQH GNGHVLTHTQ LADAKTGQLR
GELTQTEATA LARQRFSGPS EVERVEYLTT TNGHHEYREK PLPAYAITFR QPAHATVYVA
AQLGTVQTVR TDPWRIFDVL WMLHTMDYEG RDDINNGLLR AFSILGLLTI SSGFALYFVS
SPQLRRKPKQ GRKSQPTAF