Gene Slin_6813 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6813 
Symbol 
ID8716073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp174173 
End bp175036 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391562 
Protein GI284005742 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.483229 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAC TAAGTAAACC CACCGCCTTT GTTGCGCTCC TGACCGGACT GCTGGCACAA 
CCAACGCTGG CGCAACTGAG CTTACCAGAA CCCTCCCCAT CAGCATCGAT CAAACAGAAA
ATCGGTTTTA CTGACCTGAC CATTGACTAT TCGCGACCGG CAGTAAAGGG CCGCACCATT
TTTGGCAAGC TGGTTCCTTA TGGCGAGTTG TGGCGCACCG GCGCGTCGGA TGCCACGATC
CTGACCAGTA CCGATCCGAT GACCGTAGGC GGAAAACTGC TGCCCGCTGG CAAGTATTCG
CTCTTCACCA TCCCAACCCG CACCGAATGG ACGGTGATCC TGAACTCGTA CACGGAAGGG
CATGGCACGG CGGGGTACGA AGCCAAGAAC GATGTGCTGC GGTTTACGGT CAAACCAGAC
TCGTCCGTGC GGTTTTATGA GTCGTTTACC ATCGAGGTGC AGGATTTGGT AAAGAATCAG
GCCAATCTGT ACCTGACATG GGCTAATACG TCGGTGCATT TTCCGCTCGT GAGCAACGCT
GACGAGCGCA TTACGGCAGA CATCCTAAAA CGTACGGCAG CCGCCACCGA TGAGGAGTCG
GGCGTATTTT ACCAGTCGGC TCTGTATTAT TTCGACACAA ACAAGGATGC CAAACAGGCC
TTGACGTGGG CCACCAAAGC GGCCACCGGC AAACCGGCGT TCAATTACCT GCATCTGCAA
GCCAAGCTGC TGGCAATGAC AGGTGACTAC AAAGCGGCCA TTGCTGCGGC CCGGAAGTCA
GCAGAATTAG CCGCCGAGAA GAAGTTTGCC GAGTACGTTA CGCTCAATAA GCAGCTCATT
GCTGAGTGGG AAAAGAAATT GTAA
 
Protein sequence
MNPLSKPTAF VALLTGLLAQ PTLAQLSLPE PSPSASIKQK IGFTDLTIDY SRPAVKGRTI 
FGKLVPYGEL WRTGASDATI LTSTDPMTVG GKLLPAGKYS LFTIPTRTEW TVILNSYTEG
HGTAGYEAKN DVLRFTVKPD SSVRFYESFT IEVQDLVKNQ ANLYLTWANT SVHFPLVSNA
DERITADILK RTAAATDEES GVFYQSALYY FDTNKDAKQA LTWATKAATG KPAFNYLHLQ
AKLLAMTGDY KAAIAAARKS AELAAEKKFA EYVTLNKQLI AEWEKKL