Gene Slin_6762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6762 
Symbol 
ID8716026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp129157 
End bp129603 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content41% 
IMG OID 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003391515 
Protein GI284005695 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.948103 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGCAC TCCGCTATAA AATAATAAAG TCCGAGAAGC AATATCGTGA CTACTGTACT 
GATTTAGAAA CGCTAGTAAC TGGAAACGAT CAAGGAGAAA ATACGCAGGA TGAAATCGAG
TTGCTCACTT ATTTGATTGA AAAGTGGGAT GCCGAACATA ACTCCTTCGA GGATGTAGAT
CCCATTGAGT TACTCACCGC ATTGATGAGC GAGAAATCGC TTAAAGCGAA AGATCTGACC
CAGATTTTGG GCGTAAGTAA AAGTCTTGTT TCAGATATTT TGCACTATAA GAGGGGGTTG
TCTAAAGAGA TCATCAGAAC ACTTTCTAGC TACTTTAGCG TTTCCCAGGA AGCCTTCAAC
CGGCCCTATA AATTGAAGGT ACCAGCAAAT AGCCACTTTA AGAATGCCAG TGTTATGAAC
ACTAGAAAAG ACCTGCAATT GGCTTAG
 
Protein sequence
MEALRYKIIK SEKQYRDYCT DLETLVTGND QGENTQDEIE LLTYLIEKWD AEHNSFEDVD 
PIELLTALMS EKSLKAKDLT QILGVSKSLV SDILHYKRGL SKEIIRTLSS YFSVSQEAFN
RPYKLKVPAN SHFKNASVMN TRKDLQLA