Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6755 |
Symbol | |
ID | 8716019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013731 |
Strand | - |
Start bp | 119128 |
End bp | 120366 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | |
Product | sodium/calcium exchanger membrane region |
Protein accession | YP_003391508 |
Protein GI | 284005688 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.546188 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTCGT TTATTGTGTA TGTCTTACTC GCCGTTATGG CCACCCTACC GGCCCTAATC CTGCGTTTTG GTACCTGGCA GCCCAATGCC CTGGTCGCTG TTATCTTCTT TGGCTGTGCC ATCTTAGCCG CCGGTTTCCT ATTGTCCTGG GGAGCCGAAC ATGCCGAGCG GTTTGTTTCC CAGGGGTTGA TCCTGGCCTT GGTCGCTTTA GTGACGGTGC TGCCTGAATA CGCAGTCGAT CTTTATTACG CGTACAAGGC CGGTCAGAAT CCCCAGTCGA TGTATGTTCA TTACGCTGCG GCCAACATGA CGGGAGCCAA CCGGTTGCTG GTGGGGCTTG CCTGGCCGCT TATAGCCGTC TTGCACTGGT ACAAGACCCG TCAGCGGGCC ATTGACCTGC AACCCGCTAA CGGACTGGAG ATCGGCTTTC TGCTGGGTGC CAGTATGTAC GCCTTTATCA TCCTGCTCAG GGATCAGATC GGCTTGTGGG ATACCCTCCT CCTGGTTGGG TTGTTTGGAG CCTATTTATG GCGGGTTAGC CACGCACCCA AGGCTCAGGA AGAGGAGGAA GAAGAGGAGG AGCCCGGCCC GGCAGCCGCC TTGTCGAAGC TGCCCAAAGC GCAGCAGTGG GGCGTCATCG GTACGCTTAC GGCGGTGGCC AGTGGGGTGA TTTTGGTGTG CGCCGAGCCG TTCGCTGAAT CCATCGTGCG GGCGGGTCGC CAGGTAGGGA TCGATGAGTT TCTGCTGATC CAGTGGCTGG CTCCGCTGGC CAGTGAAGCT CCCGCCGTCT CCATTGCGGT CTTGTTTGTC CTGGCTGGCC GCTCCGAGGC GGGGCTGACG GCCATGATTA GTGATAAAAT CAATCAGTGG ACGCTGCTGA TTGGTATGCT GCCGCTGGCC ATGAGTGTTG GGGCATCTGC ACTCACGGCC CTGCCTTTAG ACGCCCGCCA GCATGAAGAA TTTTTTCTGA CGGCTACCCA GTCGCTCTTT GGGGTGGCCG TACTGCTTCG GTTCCGGCTT AGCCTATGGC ATGCCGCTAT CCTGGTTGGT TTGTTCAGCG CCCAGATTGG ATTGGCCTTT CATTACCAGC ACGATCCCGT TGCCAGTGTG AGGGCGCTGA CCTATTTGGG ATGGGTGTAT CTGGCATTAG CCTTAGTCTT CTTTATCCTA AACTTCCCCC AGCTCAAAGC AGTAGCCCGG CGGGTGCTCA GGGGTAGCGC TGGGAGTATA CCGGATTGA
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Protein sequence | MRSFIVYVLL AVMATLPALI LRFGTWQPNA LVAVIFFGCA ILAAGFLLSW GAEHAERFVS QGLILALVAL VTVLPEYAVD LYYAYKAGQN PQSMYVHYAA ANMTGANRLL VGLAWPLIAV LHWYKTRQRA IDLQPANGLE IGFLLGASMY AFIILLRDQI GLWDTLLLVG LFGAYLWRVS HAPKAQEEEE EEEEPGPAAA LSKLPKAQQW GVIGTLTAVA SGVILVCAEP FAESIVRAGR QVGIDEFLLI QWLAPLASEA PAVSIAVLFV LAGRSEAGLT AMISDKINQW TLLIGMLPLA MSVGASALTA LPLDARQHEE FFLTATQSLF GVAVLLRFRL SLWHAAILVG LFSAQIGLAF HYQHDPVASV RALTYLGWVY LALALVFFIL NFPQLKAVAR RVLRGSAGSI PD
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