Gene Slin_6755 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6755 
Symbol 
ID8716019 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013731 
Strand
Start bp119128 
End bp120366 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content58% 
IMG OID 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_003391508 
Protein GI284005688 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.546188 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCGT TTATTGTGTA TGTCTTACTC GCCGTTATGG CCACCCTACC GGCCCTAATC 
CTGCGTTTTG GTACCTGGCA GCCCAATGCC CTGGTCGCTG TTATCTTCTT TGGCTGTGCC
ATCTTAGCCG CCGGTTTCCT ATTGTCCTGG GGAGCCGAAC ATGCCGAGCG GTTTGTTTCC
CAGGGGTTGA TCCTGGCCTT GGTCGCTTTA GTGACGGTGC TGCCTGAATA CGCAGTCGAT
CTTTATTACG CGTACAAGGC CGGTCAGAAT CCCCAGTCGA TGTATGTTCA TTACGCTGCG
GCCAACATGA CGGGAGCCAA CCGGTTGCTG GTGGGGCTTG CCTGGCCGCT TATAGCCGTC
TTGCACTGGT ACAAGACCCG TCAGCGGGCC ATTGACCTGC AACCCGCTAA CGGACTGGAG
ATCGGCTTTC TGCTGGGTGC CAGTATGTAC GCCTTTATCA TCCTGCTCAG GGATCAGATC
GGCTTGTGGG ATACCCTCCT CCTGGTTGGG TTGTTTGGAG CCTATTTATG GCGGGTTAGC
CACGCACCCA AGGCTCAGGA AGAGGAGGAA GAAGAGGAGG AGCCCGGCCC GGCAGCCGCC
TTGTCGAAGC TGCCCAAAGC GCAGCAGTGG GGCGTCATCG GTACGCTTAC GGCGGTGGCC
AGTGGGGTGA TTTTGGTGTG CGCCGAGCCG TTCGCTGAAT CCATCGTGCG GGCGGGTCGC
CAGGTAGGGA TCGATGAGTT TCTGCTGATC CAGTGGCTGG CTCCGCTGGC CAGTGAAGCT
CCCGCCGTCT CCATTGCGGT CTTGTTTGTC CTGGCTGGCC GCTCCGAGGC GGGGCTGACG
GCCATGATTA GTGATAAAAT CAATCAGTGG ACGCTGCTGA TTGGTATGCT GCCGCTGGCC
ATGAGTGTTG GGGCATCTGC ACTCACGGCC CTGCCTTTAG ACGCCCGCCA GCATGAAGAA
TTTTTTCTGA CGGCTACCCA GTCGCTCTTT GGGGTGGCCG TACTGCTTCG GTTCCGGCTT
AGCCTATGGC ATGCCGCTAT CCTGGTTGGT TTGTTCAGCG CCCAGATTGG ATTGGCCTTT
CATTACCAGC ACGATCCCGT TGCCAGTGTG AGGGCGCTGA CCTATTTGGG ATGGGTGTAT
CTGGCATTAG CCTTAGTCTT CTTTATCCTA AACTTCCCCC AGCTCAAAGC AGTAGCCCGG
CGGGTGCTCA GGGGTAGCGC TGGGAGTATA CCGGATTGA
 
Protein sequence
MRSFIVYVLL AVMATLPALI LRFGTWQPNA LVAVIFFGCA ILAAGFLLSW GAEHAERFVS 
QGLILALVAL VTVLPEYAVD LYYAYKAGQN PQSMYVHYAA ANMTGANRLL VGLAWPLIAV
LHWYKTRQRA IDLQPANGLE IGFLLGASMY AFIILLRDQI GLWDTLLLVG LFGAYLWRVS
HAPKAQEEEE EEEEPGPAAA LSKLPKAQQW GVIGTLTAVA SGVILVCAEP FAESIVRAGR
QVGIDEFLLI QWLAPLASEA PAVSIAVLFV LAGRSEAGLT AMISDKINQW TLLIGMLPLA
MSVGASALTA LPLDARQHEE FFLTATQSLF GVAVLLRFRL SLWHAAILVG LFSAQIGLAF
HYQHDPVASV RALTYLGWVY LALALVFFIL NFPQLKAVAR RVLRGSAGSI PD