| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6754 |
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| Symbol | |
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| ID | 8716018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013731 |
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| Strand | - |
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| Start bp | 117693 |
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| End bp | 119042 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_003391507 |
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| Protein GI | 284005687 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.406805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTACGAA TACGAAAACG CCAATGGTCA GCGCCTGGTT TTGCCCTGAT TCTGGGCTGG
TTGCTGGCAA GTCCCTCTTC TTGGGCGCAG ACCATGAGTA CAATGAGTAC CCCTCCTACC
GCTGACACGC TTCGGTTCAG TTTAGCCCAG GTGGAGCAGA TGTTTCTCGA CCGCAACTTT
CAACTTCTCG CTCAGAAGTA CCAGATCGAC ATCGCGGGGG CGGGGGTGAC CCAAGCCGGG
CTGCATGCCA ATCCGAACGT GCTGTTCATG ACGAATCTGT ATAATCCCAA TACGAACCGG
GTGTTGCCCC TACGTACTCC CTCACAGGTC GATCTGAACA ATCAGGTGTA TAATAGTGGT
TACGTGCAGT TACAAGTACA ACAACTCATC CAACTGGCGG GTAAACGCAG CAAGCTCATT
GCACTGGCTG AAAGTAATCG CAGTCTGGCT CAACTGGCCT TTCGGGAGTT ACTGCGTGAT
CTGCGGTATC AGTTGTATTC AACCTACGCG AACCTGTATT ACGACTTAAA AGCGCTAATG
CTGTTTCGCA GCGAACTGGC CCGGCAGCAA CGCCTGGCCG ACTCCTACCG GGTCGCCTTG
AAATCAGGCG GTATCGCCCC CTTCGAAGTA GTCCGGCTGG ACCTGGCCAA CCGTGATTTA
CAGGCTAACA CCGCTCACTA CCAGAGTCAG ATTGCCGATG AACAGGCCAC CCTGCGCGTC
TTGTTGCGAC GGGGAGATGA CTCATTCGTG TATCCAATCA GCATCCCGGC CTTACGGCCT
GTGCTGCCGC CCGTGGCGAC CGCCCTCGAT TCGGCCCTGG CCCACCGGCC GGATGTGGCC
CTTACCCAGG AACAGATCAC CAACGCCGAA CGGAGCCTGT CGCTTGAACG GGCCCGGAGA
ACTCCTAACC TGACCGTTGG TGTTGATTAC GAACGGTATG GTAATGCTTA TCTCAACTTT
ATAGGCCTCC AATTACTGAT GGATGTGCCG ATTCGAAACC GGAATCAGGG CGCAATCCAA
GCGGCTGAAC TGACGTTGAA AAGTGTGGGC GTAGGGCTGG ATAATCAGCG TAACCTGGTT
AAAAGCGATG TGCTGAACGC ATATGATAAA CTTAAGGCCT ACTATACCCT CTTCAACAGC
CGACCGCCTG ATACGTTGAA TCAGAGTCAG ATTCAGCAAA TCGCTACCGA TGCTACCCGG
CTCTACAACG CCCGCACCAT CGGCCTGCTG GATTATCTGG ACAAAATTCG TGTCTACCAA
CAGGCGCAGC TAAATGATAT CAATTTAGAA AACAATCTGT TCCAGTCCCA GCAATTGCTC
AATTATGCGA CAAACACCCG ATTTTTCTAA
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| Protein sequence | MLRIRKRQWS APGFALILGW LLASPSSWAQ TMSTMSTPPT ADTLRFSLAQ VEQMFLDRNF
QLLAQKYQID IAGAGVTQAG LHANPNVLFM TNLYNPNTNR VLPLRTPSQV DLNNQVYNSG
YVQLQVQQLI QLAGKRSKLI ALAESNRSLA QLAFRELLRD LRYQLYSTYA NLYYDLKALM
LFRSELARQQ RLADSYRVAL KSGGIAPFEV VRLDLANRDL QANTAHYQSQ IADEQATLRV
LLRRGDDSFV YPISIPALRP VLPPVATALD SALAHRPDVA LTQEQITNAE RSLSLERARR
TPNLTVGVDY ERYGNAYLNF IGLQLLMDVP IRNRNQGAIQ AAELTLKSVG VGLDNQRNLV
KSDVLNAYDK LKAYYTLFNS RPPDTLNQSQ IQQIATDATR LYNARTIGLL DYLDKIRVYQ
QAQLNDINLE NNLFQSQQLL NYATNTRFF
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