| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6637 |
|---|
| Symbol | |
|---|
| ID | 8730423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 8072294 |
|---|
| End bp | 8073601 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | |
|---|
| Product | Alpha-N-acetylgalactosaminidase |
|---|
| Protein accession | YP_003391393 |
|---|
| Protein GI | 284041463 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCGC TGTACACGAC CGCTCAGGCG GGCAGTCGGC CTTCGGCTTT ATCGAAAGTA
CGGCTGGCAT TCATTGGCGT TGGTCTGCGG GGGCGCAACC ACCTTCAGCA GGCCCTTTAC
CGGTCCGATG TCGAGGTGAC CGCCCTCTGC GACATTTCGG CCGATGCCAT CGCCAAATCC
AACGCCATGA TTGAAAAGGC AGGCCGTAAA ACTCCGCCCG CCTATACCAA AGGCGACGAA
GCCTTTCTGG ACATGCTGAA ACGGGACGAT ATCGACGGTG TCGTGATTGC CACCCCCTGG
GAATGGCATA CACCCATGGC CGTGGCGTCC ATGAAAGCGG GTAAATACAC CGGACTCGAA
GTATCGGCCA CGGTGACGCT AAAGGAGTCG TGGGATCTGG TCAATACGTA CGAGAAGACG
AAGTCGCACT GCATGCTGCT GGAGAACGTC TGCTACCGGC GCGATGTCAT GGCCATTCTT
AACATGGTAC GTCAGGGTAT GTTCGGCGAG ATGACCTACG CGCACTGCGG CTATGAACAC
GACCTGCGGA ATATCAAATT CAACGACGGT ACCGCCCGTG GCGTCGGCGC TGAATTCGGC
GAAAAAGGGT TCTCGGAGGC CCATTGGCGC ACCCAGCACT CCGTCGACCG GAATGGCGAT
CTCTACCCCA CGCACGGTCT GGGGCCGGTG GCCCACTGGC TCAACATCAA CCGGGGCAAC
CAGTTTGTCC GGCTGACATC GATGGCTACC AAAAGCCGGG GTCTGCACAA GTATGTTGTG
GACAAAGGCG GGGCCAACCA CCCCAATGCC AAAGTGAACT TCAAACTGGG CGACGTAGTG
ACCACCATGG TCGAGTGCGC CAACGGAGAG AACATCGTTA TCATCCACGA CACCAACTCG
CCCCGCCCCT ACTCACTGGG ATTCCGGGCG CAGGGTACGC AGGGAATCTG GATGGACGAC
GGCGACACCA TTTATCTGGA GGGCGTCAGT CCGAAGCCGC ACCAGTGGGA ATCGTTCAGC
CCGTACCAGG AAAAATATGA TCACCCGCTC TGGAAACAGC ATGTCGAAAC GGCACAGAAT
GCCGGACACG GCGGCATCGA CTTTTTCGTC CTGCGCGGCT TCATCGAATC CATCAAAAAT
CAGGTAGCCC CGCCCATCGA CGTCTACGAT GCGGCTGCCT GGAGCGCCAT CAGCCCGCTG
TCGGAGCAGA GCATTGCAGG CGGCAGTAAA GCCGTCGACA TCCCCGATTT CACCCGTGGC
AAATGGAAGA CCAACAAGCC CATCTTTGGC CTTACCGACG TGTACTGA
|
|---|
| Protein sequence | MPSLYTTAQA GSRPSALSKV RLAFIGVGLR GRNHLQQALY RSDVEVTALC DISADAIAKS
NAMIEKAGRK TPPAYTKGDE AFLDMLKRDD IDGVVIATPW EWHTPMAVAS MKAGKYTGLE
VSATVTLKES WDLVNTYEKT KSHCMLLENV CYRRDVMAIL NMVRQGMFGE MTYAHCGYEH
DLRNIKFNDG TARGVGAEFG EKGFSEAHWR TQHSVDRNGD LYPTHGLGPV AHWLNINRGN
QFVRLTSMAT KSRGLHKYVV DKGGANHPNA KVNFKLGDVV TTMVECANGE NIVIIHDTNS
PRPYSLGFRA QGTQGIWMDD GDTIYLEGVS PKPHQWESFS PYQEKYDHPL WKQHVETAQN
AGHGGIDFFV LRGFIESIKN QVAPPIDVYD AAAWSAISPL SEQSIAGGSK AVDIPDFTRG
KWKTNKPIFG LTDVY
|
|---|
| |