Gene Slin_6613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6613 
Symbol 
ID8730399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp8036421 
End bp8037722 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content54% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391369 
Protein GI284041439 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTCCC CTACAATGTT TTTAGCCTAC ATGAAAAAAC TCGTCGTTGT CCTCATCCTT 
TTCGGCCTGA CGGTCGTTTC CGTTTCCGCT CAGGTCTTTA AGGCAGGGGC GGCCGTCCGG
CTGATTACCC CCAGTCCGTT GCTGCCCGTT TCCGGGGGCA TTGGCACGCC TAAAAAAGCC
GTCGAGACAA AAGGGGAGCT GTTCGTTCGG GCCTGTGTTT TTGAACGGGG GAGTACACGT
ATCGCCATCG TCAGCGTCGA TAACCTCGGC TGGCCATCGG TACTGGGCAA CAAATCGAGA
GCGCTCATCA AGGGAATTCC GCCCGAAAAC ATTCTCATCG GTGCTACCCA TACGCATAGT
GGACCCGATG CGTATGGTTT TCCGAACGAG AAAGGTGAGT CGTTTGCCGA TCTTCCGTAT
CTGGACAAGT GCGTACACGC CATCGCCGAT GCCGTCAATG AAGCCCTGGC AACGGCGAGT
CCGGCTACCC TGAAAATTGC GGTTGGCGAT GCCAAAGGGC AAATCGCCTA CAACTATTAC
GCTCCGGCAT TGTATGATCC TCGCTGTGGG GTCATTCAGG CTGTGGCCAC ATCCGGTTCA
ACGGCCGGAA AACCCATTGT CACGCTGGTT AACTACGCCA TTCACCCGGA GGTGATCGGC
TCTGATCGGG GTATCCTCAG CCCGGATCTG TGCGGGCCAC TTTGCCAGCG AATCGAGTCG
AAAGCGGGGG GCGTGGCCCT GTTCATGAAC GGCGCTCAGG GCGGCATGGT CACGGCTGAT
AATCGAAGGG AAGGCGGTAA GGAAGCCAAT ACCTGGGAGG AATGTACCCG CATTGGCGAA
CTGCTGGCCG ACGAAGCCTT ACGTATTGTG ACCCCCGCTG AGCCACAAGC GAATCCAACG
GTATTCTGTA CCGTTCGAAA CGTTTCGTTC CCCATCGAGT CGGACGTTAT GAAATATATT
GTCAAGAACT CACCGCTGAA GTACCCCGTA GCTACCGGAG ACAAGGTGGT AGCTCAGGTA
AACCTCCTCA ACGTTGGCAG TGCGCAGATA CTGACCATTC CCGGCGAAGC CCTGCCAAAC
ATCGGGTATT ATATAAAACG ACACATGCAT GCCCCTGTGC CTTTGTTGTT CGGTCTGACA
AACGACGCCT TTGGGTATAT GCTCACCAAA GTGGACTTCA ATAGTTTTAA ACGGTACGAG
TATATCAGCC GGACCAGTCT GGGGGAGAAC ACCGCTGAAA TTTATATAGA AGAAGCCCTT
AAGTTAATTG CCGGTTCGCC AAAAGCAGAT GGCTATAAAT AG
 
Protein sequence
MRSPTMFLAY MKKLVVVLIL FGLTVVSVSA QVFKAGAAVR LITPSPLLPV SGGIGTPKKA 
VETKGELFVR ACVFERGSTR IAIVSVDNLG WPSVLGNKSR ALIKGIPPEN ILIGATHTHS
GPDAYGFPNE KGESFADLPY LDKCVHAIAD AVNEALATAS PATLKIAVGD AKGQIAYNYY
APALYDPRCG VIQAVATSGS TAGKPIVTLV NYAIHPEVIG SDRGILSPDL CGPLCQRIES
KAGGVALFMN GAQGGMVTAD NRREGGKEAN TWEECTRIGE LLADEALRIV TPAEPQANPT
VFCTVRNVSF PIESDVMKYI VKNSPLKYPV ATGDKVVAQV NLLNVGSAQI LTIPGEALPN
IGYYIKRHMH APVPLLFGLT NDAFGYMLTK VDFNSFKRYE YISRTSLGEN TAEIYIEEAL
KLIAGSPKAD GYK