| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6606 |
|---|
| Symbol | |
|---|
| ID | 8730392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 8024362 |
|---|
| End bp | 8025186 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | |
|---|
| Product | HpcH/HpaI aldolase |
|---|
| Protein accession | YP_003391362 |
|---|
| Protein GI | 284041432 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGAT CAACCCACCC GAGTCTCCGT CAAAAATTAC AACAGGGCCA GCGTGTTTAT
GGCACCTGCA TCACGTCGAC TGCACCCATG TGGCCGAAAG CCGTTCAGCA GGTCGGACTG
GACTTCGTCT TTTTAGACAC TGAACACATT CCAATGGACC GGGCCGAACT GGCTACGCTT
TGCCAGCAGT TCCGGGCCTA CGGAATTACG CCCATCGTCC GGATACCCAG TCCCGACCCA
TTCCGGGCCT GTCAGGTAAT TGATGGCGGG GCCATTGGCG TTGTAGCCCC ATACCTCGAA
TCGGCAGAGC AGGTTCGGGA GCTGGTGGGC GCGACCAAGT ACCGACCGCT AAAAGGCGAA
CGGTTAGCCA ATGTGCTGAA TGGTACCGAA ATTCTGTCGG CCGATATGCA GGCATATATC
ACGGCTTATA ACGCCGATCA GTTGTGCATT GCCAATATAG AAAGCGTACC CGCGCTGAAT
CGGCTGGACG AGCTGTTGTC GGTGCCGGGT CTCGATGCCG TGTTCATCGG TCCCCACGAT
TTATCGGTCA GTCTGGGCTT ACCGGAGCAG TACGACCACC CCGACTTCGA TGCGGCCGTT
CGCACCATTA TTCACACCGC CCGTTCGAAA GGACTGTCCA TCGGCATTCA TTTTTCGCTG
GAACCCGAAC GCCAGATAAA GTGGATAAAC GAGGGCGTCA ACATCATCGT GCATAGTTTC
GACATTGCGC TCTTCAGCCA GCGTCTTCGC CACGACCTGT CCGTTATTCG GGAAGCCGTA
GGCGACCATC AGGGGCCGGA GCTGGTCGGG ATGCCCGTTA TTTAA
|
|---|
| Protein sequence | MKGSTHPSLR QKLQQGQRVY GTCITSTAPM WPKAVQQVGL DFVFLDTEHI PMDRAELATL
CQQFRAYGIT PIVRIPSPDP FRACQVIDGG AIGVVAPYLE SAEQVRELVG ATKYRPLKGE
RLANVLNGTE ILSADMQAYI TAYNADQLCI ANIESVPALN RLDELLSVPG LDAVFIGPHD
LSVSLGLPEQ YDHPDFDAAV RTIIHTARSK GLSIGIHFSL EPERQIKWIN EGVNIIVHSF
DIALFSQRLR HDLSVIREAV GDHQGPELVG MPVI
|
|---|
| |