| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6600 |
|---|
| Symbol | |
|---|
| ID | 8730386 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | + |
|---|
| Start bp | 8017291 |
|---|
| End bp | 8018487 |
|---|
| Gene Length | 1197 bp |
|---|
| Protein Length | 398 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003391356 |
|---|
| Protein GI | 284041426 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAACCC TGCTGACTCT ACCGAAAGTT GTGTTCGGTC AGACGCTTAA CCTGGGGACC
ACATCCGGAT TTGCACTGTT CACCGCAAAC GGAGCACTTA CCAATGCAGG GGCATCTGCT
ATAGTAGGCG ATATTGGTAC GAACGTGGGA GCCATTAGTG GTTTCGAAAC GGCATCCGTA
ACGGGCAGTA CCCGTCCTGC CGGCAGTACG CAGTCCGTGC AGGCGGCCCT TGATGTTGTA
TCGGCTTATA ATTCGATGGG TTTATTTACC TGCGGTACCC AGATAGCCGC TGAGTTAGGC
GGTCAGACGC TGTCGCCGGG AGTCTCCTGT CAGAGTACGG CTTCGCCTAC CACCTTGAAT
GGAACGTTAA CATTAAGCGG GTCAGGAACC TTCATTATCA AACTAAGTAG TGCTCTGGTC
ACCGCAACAA ACTCCAGTAT TGTGCTGACA AATGGTGCTA CCGCTAACAA TGTATTTTTC
CGAATAGAAG GAGCGGCAAC GCTGGGTACC GGTTCTTCGT TCAAGGGAAC TATACTGGCC
CTGGGTGCTA TCGTCCTGAA CACTACAAAC CTTGAAGGAA GAGCCCTGTC GACAACCGGA
GCCATTACCC TGAATGCCAG TAACGTTACG AATGTAGCAG TCGCCAACCC TCTGCCGGTT
TCGCTGGCGT CCTTCACGGT AAAGGCGCAG CCCAATCATA CTGTAAGAAT AGACTGGGTA
ACATCGCTGG AAACCAATAA TAAAAATTTC CTGATCGAGC GCAGCAAAGA CTTAAGGCTC
TTTGAGACCG TAGGTGTCGT GAGCGAACTG GCCCCTATGA GTAACGCTCT GAAGACTTAC
AATATGATTG ACGCGATGCC TTATGCAGGT ACCAGTTACT ACCGCCTGAC CCAAACCGAT
CTGAATGGTA AGGCCAGCGT TTACCCGGCT GTTTCGGTCG TGTTACGGGA CGATGCCTAT
GGAGTATTTC CCAACCCGGT TGTGGGTGAA GGTAGGTTTG GCCTTCGGCT GGATGAGCCC
GAAACGGCAA CGGTAAAATT TTATAGTGCG GACGGACGTG CCTTACCACT TCAGAAGACG
GGCGTTGAGT CGGGCAATCT TCTCCTGAAA ATGAGCAGCA AACTCGCAAC CGGGGTGTAC
CTACTAACCG TTGAAGAACG GGGTCAGGCC CGTCAGCACC GTATTATTAT CGAGTAA
|
|---|
| Protein sequence | MVTLLTLPKV VFGQTLNLGT TSGFALFTAN GALTNAGASA IVGDIGTNVG AISGFETASV
TGSTRPAGST QSVQAALDVV SAYNSMGLFT CGTQIAAELG GQTLSPGVSC QSTASPTTLN
GTLTLSGSGT FIIKLSSALV TATNSSIVLT NGATANNVFF RIEGAATLGT GSSFKGTILA
LGAIVLNTTN LEGRALSTTG AITLNASNVT NVAVANPLPV SLASFTVKAQ PNHTVRIDWV
TSLETNNKNF LIERSKDLRL FETVGVVSEL APMSNALKTY NMIDAMPYAG TSYYRLTQTD
LNGKASVYPA VSVVLRDDAY GVFPNPVVGE GRFGLRLDEP ETATVKFYSA DGRALPLQKT
GVESGNLLLK MSSKLATGVY LLTVEERGQA RQHRIIIE
|
|---|
| |