Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6596 |
Symbol | |
ID | 8730382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 8012243 |
End bp | 8012851 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | |
Product | alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen |
Protein accession | YP_003391352 |
Protein GI | 284041422 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATAAGAT TATATAGACT AATCGTATTA GTCCTGACAA TCATCAGTTG CCAAACTACT GTTGAAACCC AGTTACCAGA CGTCAAAGCC AACTTATTTA AGGCTGGTAC AATCGATTTA CAAGTAGCAA CCCAAAATAA AGTTACTCTG CTGACTATAT GGTCAATTTT TTGTGGTCCA TGTCTTAAAG AATTACCTGA ACTTCAAACT GTTTATGACC GGTATAAACT GAATAAACGA GTTACCGTTT TAACGTTAGC CCTAAACACA AATCAGGAGT TAAACCGCTT TTTGTCTACC TCTGATAGTG CCGACATTTA CCGAAAAATA TTTGTGCATT CAGGTTTGAA ACAACTTACC CTTCCCATAC TTGTCGGCAC TACCTCACCT TATCAGATCG AAAACGGCAG TGCCCGCCTA AGCGATACAA AAGCGGCTGA TCATTTGAAG CGGATATTTA AGTTCGATGC AATACCAACG ACGCGTATTT ACGATCAAGG TGGGAAGTTG ATTTTTGAGC AGAAAGGAGT TGAAACATCG GCCTTGGGGC TACGTCGTTA CCGACTAAAC TTAATCAAGA AATTAGATAG TCTAGCGACC CATCATTAA
|
Protein sequence | MIRLYRLIVL VLTIISCQTT VETQLPDVKA NLFKAGTIDL QVATQNKVTL LTIWSIFCGP CLKELPELQT VYDRYKLNKR VTVLTLALNT NQELNRFLST SDSADIYRKI FVHSGLKQLT LPILVGTTSP YQIENGSARL SDTKAADHLK RIFKFDAIPT TRIYDQGGKL IFEQKGVETS ALGLRRYRLN LIKKLDSLAT HH
|
| |