Gene Slin_6596 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6596 
Symbol 
ID8730382 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp8012243 
End bp8012851 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content40% 
IMG OID 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_003391352 
Protein GI284041422 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAAGAT TATATAGACT AATCGTATTA GTCCTGACAA TCATCAGTTG CCAAACTACT 
GTTGAAACCC AGTTACCAGA CGTCAAAGCC AACTTATTTA AGGCTGGTAC AATCGATTTA
CAAGTAGCAA CCCAAAATAA AGTTACTCTG CTGACTATAT GGTCAATTTT TTGTGGTCCA
TGTCTTAAAG AATTACCTGA ACTTCAAACT GTTTATGACC GGTATAAACT GAATAAACGA
GTTACCGTTT TAACGTTAGC CCTAAACACA AATCAGGAGT TAAACCGCTT TTTGTCTACC
TCTGATAGTG CCGACATTTA CCGAAAAATA TTTGTGCATT CAGGTTTGAA ACAACTTACC
CTTCCCATAC TTGTCGGCAC TACCTCACCT TATCAGATCG AAAACGGCAG TGCCCGCCTA
AGCGATACAA AAGCGGCTGA TCATTTGAAG CGGATATTTA AGTTCGATGC AATACCAACG
ACGCGTATTT ACGATCAAGG TGGGAAGTTG ATTTTTGAGC AGAAAGGAGT TGAAACATCG
GCCTTGGGGC TACGTCGTTA CCGACTAAAC TTAATCAAGA AATTAGATAG TCTAGCGACC
CATCATTAA
 
Protein sequence
MIRLYRLIVL VLTIISCQTT VETQLPDVKA NLFKAGTIDL QVATQNKVTL LTIWSIFCGP 
CLKELPELQT VYDRYKLNKR VTVLTLALNT NQELNRFLST SDSADIYRKI FVHSGLKQLT
LPILVGTTSP YQIENGSARL SDTKAADHLK RIFKFDAIPT TRIYDQGGKL IFEQKGVETS
ALGLRRYRLN LIKKLDSLAT HH