Gene Slin_6587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6587 
Symbol 
ID8730373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp8000490 
End bp8001584 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content57% 
IMG OID 
ProductHeparan-alpha-glucosaminide N-acetyltransferase 
Protein accessionYP_003391343 
Protein GI284041413 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAAC CTCACCGCCT GATTTCGCTG GATGCCATGC GTGGGTTTAC CATTGCGGCT 
ATGATTGTTG CCAATTTTCC GGGTAGTGAA GAGTTTGTTT ATTTCACGCT GCGGCATTCA
CGCTGGAACG GGCTGTCATT TACCGATCTC ATTGCGCCGT TTTTCCTGTT TATCGTGGGC
GTTTCCATTG TGCTGGCCTA CGCCCGGAAG CGGGCCGATG GGAGTCCGAA AGGGCCGCTG
ATTCAGAAAA TCGTACTTCG GTCGCTGAAA ATTTTCGCGG TGGGCATGTT CCTGAACCTG
CTGCCCGATT TTGATTTCGC TACCCTCCGC TGGACGGGCA CCCTCCACCG CATCGCCATC
GTCTTTCTGG TCTGCGCCCT GCTTTTTCTA ACGACAAGCT GGAGACAGCA GGCTTGGATT
GCTACCCTCA CGCTGCTTGC CTACTGGCTG GCTATGACCC AAATTCCGAC GCCGGACGTA
GGCCGCGTGG TGCTGGAACC GGGCCAAAAT CTGGCGGCCT GGCTCGACCG GCGCTACCTG
CCGGGCCGGA TGTGGCAGGG CACCTGGGAC CCCGAAGGCA TTCTCAGCAC GTTTCCCTCC
ATTGTAACGG GTATTTTGGG TATGCTGGCC GGTCGCCTGA TGGTCAGTCC CGCCAGCCAG
ACCGCCAAGG TGTCGTACCT CATGACGGCG GGTGTGTTTA CGGCAGCTCT GGGCTACTTC
TGGGGGTTGA CGTTCCCGGT CAACGAAAAC CTCTGGACCA GTTCCTTCGT GCTGGTGACG
GCCGGTTTTG CCGCTCTTGT GCTTGGAGCC GTCTATTTTC TGGTTGATGT GCTGGGGCAT
ACCTCCGGCA CAAAACCGGG GGTTGTTTTC GGAGCCAACG CCATTACGGT CTATGTGCTG
GCCGACCTGT TTGCCCTCGT TTTCTACCGG CTTAAAGTTG GGGGCGAACC ATTGAACGAG
CAGGCAGTAG CAAGTCTGAC TGCCGTAGGT GTGTCGCCCG AACTCGCCAG TTTGCTGTAC
GCCCTGCTGT TTGTTGGCAT CAACTTTATA CCGGCTTATG TGCTGTACCG GCGGCATATT
TTCATAAAAC TTTGA
 
Protein sequence
MRQPHRLISL DAMRGFTIAA MIVANFPGSE EFVYFTLRHS RWNGLSFTDL IAPFFLFIVG 
VSIVLAYARK RADGSPKGPL IQKIVLRSLK IFAVGMFLNL LPDFDFATLR WTGTLHRIAI
VFLVCALLFL TTSWRQQAWI ATLTLLAYWL AMTQIPTPDV GRVVLEPGQN LAAWLDRRYL
PGRMWQGTWD PEGILSTFPS IVTGILGMLA GRLMVSPASQ TAKVSYLMTA GVFTAALGYF
WGLTFPVNEN LWTSSFVLVT AGFAALVLGA VYFLVDVLGH TSGTKPGVVF GANAITVYVL
ADLFALVFYR LKVGGEPLNE QAVASLTAVG VSPELASLLY ALLFVGINFI PAYVLYRRHI
FIKL