Gene Slin_6580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6580 
Symbol 
ID8730366 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7990366 
End bp7991610 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391336 
Protein GI284041406 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAG AGATACTGTC GAATCTAAAC AATCCCCGGC AACTGGAAAC GTTGTACTGG 
ACCAACAAAA CTACCTTCAA AGCCGCCTTT AATACGCTGT ATCCGCAATT GCAGGGCAAC
CTCCTAGCTG AAGGATGGTA CCAGCGGCTT AATTATAAGC CCGACGAACT GGCTTGGGGT
ACGGCTAAGG AGCGGCTTTT CGTAGTAGGG GCTTCCGGAC TGGCTGCGCT GCTGGCCCAG
CTACCCAAGA TAGTGTCGCT GGATGAGGGA TACTTTTATT CACGTCATGT GGGCTTCATC
GTGTTCCCGC TATTGATCGC TTACTTTGCC TGGAAAAACA AGATCTCCTG GAAAACGGGC
GCCTGGCTGG GGGGGCTTAT CCTGTTCGCC CTGGTCTTCA TCAACTTCCT TCCTAAAAAT
CCAGCCAGCA ATACCCTGAT TCTGTCCTGT ATTCATTTGC CCCTGTGGCT GTGGTCTTTG
CTGGGCTTTA CGTTTGGCGG AGGGAAGCTG AAAGGTGAGG TAAACTGGCT GGGCTTTCTG
CGGTATAACG GCGAGCTGGC CGTAGTGACC CCCTTGCTGC TGATAGCAGG CGGACTGACG
ACGGCACTTA CCATTAACTT GTTTGGACTG AGTGGCTGGA AGATCGAAAC GTTCTACTTC
AGCTATATCG TGGTTAGCGG ACTGGCCGCA GTGCCCATAG TAGCTACTTT TCTTACTCAG
ACTCAGCCCG CGCTGGTCAA CAAAGTTGCT CCGGTCATTG CAAACTTGTT TAGTCCGGTG
GCGCTGGTAA TGCTGGTGGT TTATCTGACG GCCACGGTTT TTTCGGGGAA AGATCCGTAC
CATGACCGTG ACTTTCTGTT GTTGTATAAT GCGCTGTTAA TCGGCGTGAT GGCACTTATT
TTCTTTTCGG TAGCCGAGGC CACGCCTACC AGCAAAAAGC CTGTTCAGAT TTTGATTCTT
TTCCTGTTAT CGACGGTAAC CGTAGTAGTT AACGGTATTG CGCTGTCGGC GGTTTTATTC
CGGATTTCCG AATGGGGCTT AACGCCCAAC CGGGCTGCCG TGCTGGGGGC GAATGTCTTA
ATGCTCAGTC ATCTGCTCTA CGTAAGCGTG CGGCTCTTTG GGGCTATGAC TCGCAAAAGC
GACCTCTCGC TGGTAGGCCG GTCAATGACT TTCTTCCTGC CCGTTTACAG CCTGTGGAGC
GCTATTGTGG TCTTTTTATT TCCCCTGCTC TTTGGCTTTA AGTAA
 
Protein sequence
MREEILSNLN NPRQLETLYW TNKTTFKAAF NTLYPQLQGN LLAEGWYQRL NYKPDELAWG 
TAKERLFVVG ASGLAALLAQ LPKIVSLDEG YFYSRHVGFI VFPLLIAYFA WKNKISWKTG
AWLGGLILFA LVFINFLPKN PASNTLILSC IHLPLWLWSL LGFTFGGGKL KGEVNWLGFL
RYNGELAVVT PLLLIAGGLT TALTINLFGL SGWKIETFYF SYIVVSGLAA VPIVATFLTQ
TQPALVNKVA PVIANLFSPV ALVMLVVYLT ATVFSGKDPY HDRDFLLLYN ALLIGVMALI
FFSVAEATPT SKKPVQILIL FLLSTVTVVV NGIALSAVLF RISEWGLTPN RAAVLGANVL
MLSHLLYVSV RLFGAMTRKS DLSLVGRSMT FFLPVYSLWS AIVVFLFPLL FGFK