Gene Slin_6554 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6554 
Symbol 
ID8730340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7955411 
End bp7955911 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content52% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391310 
Protein GI284041380 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.999117 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACCAT CTAACCAATC GGTTACTGAT GTAAATTCGA CTGTACGGAA GCAGTTGATT 
GCTTTACTGA CGGGCAGCAA TGCTCATCAA TCTTTCGATG CTGCGGTCAA AGACCTACCG
GCTGAATTAC GTGGCCTAAA GCCCGACAAA TTGCCGTACA CCATCTGGCA ACTGGTCGAC
CATATCCGAA TTGCTCAGTG GGATATTCTC GAATTTTCCC GCGATGCCAC CCATCAGTCG
CCACCCTGGC CAACTGGCTA TTGGTCCAAA GACCAGGCCC CGACCGACGA GGCTGCCTGG
CAACAGGCCC TGGATCAAAT CCGGCAGGAT CGTGATGCGT TTGTGGACTT ATTAAATGAC
CCAAATCGTG ATCTATACGC GCCTTTCGAA CACGGCGATG GCCAGAACCT GCTCCGTGAA
GCCCTGCTCA TTGCCGACCA TACAGCCTAT CATGTTGGTG AAATCATCAT CATCCGGCGG
TTACTGGATG CGTGGAAGTA A
 
Protein sequence
MIPSNQSVTD VNSTVRKQLI ALLTGSNAHQ SFDAAVKDLP AELRGLKPDK LPYTIWQLVD 
HIRIAQWDIL EFSRDATHQS PPWPTGYWSK DQAPTDEAAW QQALDQIRQD RDAFVDLLND
PNRDLYAPFE HGDGQNLLRE ALLIADHTAY HVGEIIIIRR LLDAWK