| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6552 |
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| Symbol | |
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| ID | 8730338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | + |
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| Start bp | 7950872 |
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| End bp | 7954054 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | |
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| Product | heavy metal efflux pump, CzcA family |
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| Protein accession | YP_003391308 |
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| Protein GI | 284041378 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.383306 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.418504 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAGA AACTAATAAT ATTCTCCCTC AAAAACCGCT GGGTCATCGT TGGCCTGGCG
GTGGCGATTA TGGGACTGGG GTTATGGTGC TTCAAACTGC TGAAGATTGA AGCGTACCCT
GATATTGCCG ATACCAACGT CATCGTGATT GCCAAATACG ATGGCCGGGC GGCAGAGGAA
GTAGAACAAC AGGTGACGAT CCCTATCGAG CGGGTACTCA ACAGTGTTCC GCACGTAACG
GATCGCCGGT CGCGGACGAT CTTCGGGTTG TCCGTTGTGC AGTTGAACTT TGATGAAACG
GTTACCGATT ACTTTGCGCG TCAGCAGGTG ATCGAACGGC TTTCGGGGGC GCAACTGCCG
GACGGCGTCG CGCCCGAACT GGCCCCGCTG ACGACGGCTG TCGGTGAGAT TTACCGGTAC
GTCATTGAAG CTCCGGCCAG CATGACACCC ATGCAGCTAC GCGATTTGCA GGATTGGGTC
ATTATTCCGC AACTGCTTCA GGTGCCCGGT CTGGCCGACG TGACGACCTT TGGTGGTCCC
ATCAAGCAGT ATCAGGTCAT ACCTGACCCG GCCAAACTCC GTAAGTTCAG CCTGACCTTG
CAGGATGTGA TCGAAGCCGT TCAGAAAAAC AACCAAAACA CGGGTGGTAA CGTCATTTCG
CGCGGTGGGC AGGGTTTTGC CGTGCGGGGA CTGGGTGCTT TGAAATCGCC CGACGATGTG
CAGAACATTG TCCTGAAAGC CAACGAAGGT GTGCCCGTTC TGGTGCGTGA TGTGGCCAGC
GTCGAAATCA ATCCCCCCTC GCCATCGGGT ATTCTGGGCT ACCGGATTCC GGACGAAAAG
CTGGACGTTG TTGGGGCTAC CGAAGGTATC GTTCTGCTGC GTCGGGGTGA GAACCCGAGC
GAGGTGCTGG AATTACTCAA AGAGAAGATC GCCGACCTCG AAGCGCGCGA ACTGCCCAAA
GGGGTTCACC TGCGGATACT GTACGATCGG GGCTTCCTGA TCGACCACTC GCTCGAAACG
GTGGCACATA CGCTCATCGA AGGTATTTCG ATTGTGGCCA TTCTGCTCGT GTTGTTTCTG
GGTAGTCTAC GGGCGGCTCT GGTCGTAACG GTCACTATTC CGTTTTCGCT GCTGTTCGCG
TTTATCCTGA TGAAGCTAGT GGGCATTCCC GCCAACTTGC TGTCGTTGGG CGCTATTGAC
TTCGGTATTA TCGTGGATGG AGCAAGCGTT ATGGCCGAAC ACCTCATCAG GCGATACCGA
TCTTCCGGTC CCGCCGACCG TAATCAAGGC ATTGTGAACG TAACGGCCCG TTCGGCGGGC
GAAGTGGCGC GGGAGATTTT CTTCTCCGTC ACCATCATTA TTCTGGCTTA CATGCCCATT
CTGCTGATGC AGCGGGTGGA AGGAAAACTG TTCAGTCCAA TGGCGCTGAC GTTGTCGTTT
GCGGTTATCG GCTCGCTGGT TTGCGCCCTG ACGCTCATTC CCGTCCTGAT TTCATTTGCT
TTCCGAAAGG CACTAGCGCC GGATGGCAAG CCGTTGAAAG AACATAAAAA TTTTCTGCTG
TCGCCGTTGG AGCGCGGGTA TCAATGGTTG TTGAAATCTA CCTTGTTCAA GGCGCCAGCG
GTCGTTGTGG GTGTGGGTAT GACCGTGGTG CTGGTTATGA TCGGTTTTGG TCTTAAGCTG
GGCACGGAGT TCCTGCCCGA ACTGGACGAA GGGTCAATTT TCATGCGGGC CTTCATGCCG
TCGGGGATTA CGATTCAGGA AAATGCGAAG ATTGCGCCCA AGATTCGGGA GATTATTAGC
AGTTATAAGC CGGTTAGTTT TGTCATCACC CAGTCGGGAC GAAACGACGA TGGCACCGAC
CCGTTCCCCA CCGACCGGAC CGAAATTCTG GTGGGCCTGA AAGATTACAG CACCTGGTCG
GATACGATTT CGAAGAAAGA GATTGTCCGA TCCATGCAGA CGAAGTTGCA GGAAGCCTTT
CCGGGCGCGT TCTTTTCATC GGGTCAGCCC ATTATCGACC AGGTTATGGA AATCGTGACC
GGCAGCGCGG CCGACCTGGC CATTTCGGTC GTCGGGAATG ACCTGACGCT GATGCGGGCC
AAAGCCGACA GCATTGCGGC TCTGGTAAAA GGTATGAACG GGGCCGTCTC GGTAAACATC
GAGCAGGAGG GACCACAGGA CCAACTGGCG ATCAATATCA ACCGCCCGGC GGCAGCGCGC
TATGGCATCA ACGTGGCTGA AATCGAGAAC ATGATCGAAG CGGCCATTGG TGGTAAAGCC
ATCGGAAATA TTTACGACGA AGCCAAACGC TACGATATTG TAGTGCGCTT CACGCCCGAA
AGCCGGGGCA GTATCGACGC CATTCGGTTA TTGCAGGTGC CTTCGGCCAC GGGTGCGCTG
ATTCCCATGA GCGAACTCGC CGACATTCAT TATGTGCAGG GCCAGACGAA TATTTACCGG
ATCAACGGCA AGCGGATGGT GACGGTTAGA ACTAACATTC GCGGCCGCGA CCAGGGCGGG
TTTGTGAAGG AGATCAGCGA GAAGGTACGT CAGCACGTAA AAATTCCCGA AGGGTACAGC
GTCATCTACG GCGGTCAGTA CGAAAACCTC GAACGGGCGG GCGGTCAACT GGCCATTTCG
ATTCCGCTGA CCATTGTCGT TGTATTCCTG TTTCTGTTCA TGCTCTACGG CAACGTCCGC
GACACGCTGC TGACGCTCAC CTGTCTGCTG TTTGCGCTGG CGGGCGGTAT CGGTGCCTTG
CTGTTGCGGG GGTACAATTT CAACGTATCG GCGGGTGTGG GCTTTGTATC GATTTTCGGT
ATTTCGGTGA TGGCGGGCGT ACTGCTCGTA TCGGCCCTCA ACCGGAATTT GATGAACAGC
ACGAAGTCAT TGAAAGACGT TACTATCGAA ACAGCGCAGG AGCAGTTTCG GGCCATCATG
GCGATCATGG TGGTGGCGAT CATCGGTCTG GTGCCAGCCG CCATCTCCAG CGGTATTGGC
TCCGATGTGC AGCGCCCCCT CGCGACGGTG ATCATCGGCG GTCTGACGAC GACGCTGTTC
TTCGCTCCAT TGATCATCCC GCCCCTGTTC TACCTCGTAA ACCGTAAGCG CCCCCGCCCA
ACACCGCTGG ATGCTGCGGG AAACCATGTG CCGGAACCGA TTGAGGAAGG GACGGAGATA
TAA
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| Protein sequence | MIQKLIIFSL KNRWVIVGLA VAIMGLGLWC FKLLKIEAYP DIADTNVIVI AKYDGRAAEE
VEQQVTIPIE RVLNSVPHVT DRRSRTIFGL SVVQLNFDET VTDYFARQQV IERLSGAQLP
DGVAPELAPL TTAVGEIYRY VIEAPASMTP MQLRDLQDWV IIPQLLQVPG LADVTTFGGP
IKQYQVIPDP AKLRKFSLTL QDVIEAVQKN NQNTGGNVIS RGGQGFAVRG LGALKSPDDV
QNIVLKANEG VPVLVRDVAS VEINPPSPSG ILGYRIPDEK LDVVGATEGI VLLRRGENPS
EVLELLKEKI ADLEARELPK GVHLRILYDR GFLIDHSLET VAHTLIEGIS IVAILLVLFL
GSLRAALVVT VTIPFSLLFA FILMKLVGIP ANLLSLGAID FGIIVDGASV MAEHLIRRYR
SSGPADRNQG IVNVTARSAG EVAREIFFSV TIIILAYMPI LLMQRVEGKL FSPMALTLSF
AVIGSLVCAL TLIPVLISFA FRKALAPDGK PLKEHKNFLL SPLERGYQWL LKSTLFKAPA
VVVGVGMTVV LVMIGFGLKL GTEFLPELDE GSIFMRAFMP SGITIQENAK IAPKIREIIS
SYKPVSFVIT QSGRNDDGTD PFPTDRTEIL VGLKDYSTWS DTISKKEIVR SMQTKLQEAF
PGAFFSSGQP IIDQVMEIVT GSAADLAISV VGNDLTLMRA KADSIAALVK GMNGAVSVNI
EQEGPQDQLA ININRPAAAR YGINVAEIEN MIEAAIGGKA IGNIYDEAKR YDIVVRFTPE
SRGSIDAIRL LQVPSATGAL IPMSELADIH YVQGQTNIYR INGKRMVTVR TNIRGRDQGG
FVKEISEKVR QHVKIPEGYS VIYGGQYENL ERAGGQLAIS IPLTIVVVFL FLFMLYGNVR
DTLLTLTCLL FALAGGIGAL LLRGYNFNVS AGVGFVSIFG ISVMAGVLLV SALNRNLMNS
TKSLKDVTIE TAQEQFRAIM AIMVVAIIGL VPAAISSGIG SDVQRPLATV IIGGLTTTLF
FAPLIIPPLF YLVNRKRPRP TPLDAAGNHV PEPIEEGTEI
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