Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6546 |
Symbol | |
ID | 8730332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7943185 |
End bp | 7944450 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003391302 |
Protein GI | 284041372 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.769373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 0.950041 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTCGAT TCCTGCTGTT AGCCATACTT ATCCTACTCT CCGGCCCTAT TGCCAACGGA CAAGGTCCCG AAGGCTATAA CTACGACGAA GCGAAAGTAG GTACCTATAC CCTGCCCGAT CTGCTCGTAA ATACAAAGGG CAAACCTGTT AAGACGAAAG CCGACTGGCG CAACTGGCGG GCAGAACTCT TGAAACTCTT TGCCGAAAAT GTGTACGGTC AAACCCCGGC TAAATCCGTT AAGCTGCGTT TCCAGACAAC ATCGGTTGAC GAATCGGCCC TGAATGGGCT GGCTGTCCGT AAACAGGTGT CCATCTTCTT TGTCGACTAT CCACAGTTAC CACCCATCGA CGTTCTGATT TACTTCCCCA AAGCCAGTAC AAAACCCGTT CCGGTATTTT TGGGGCTGAA TTTTTGCGGT AATCACTGCG TCACGGCAGA AGCAGATATT CCCCTGTCAA CCCGCTGGAT GATGGGTGAA AACAGCGACG TTTCGAATAA CAACAAGGCC ACTGAGAAAG CGCGCGGTAT GCAGGTACGA CGCTGGCCCA TCGACATGAT TGTCAAGCGC GGTTACGCCC TGGCCACCGC CTACTATGGC GACATCGAAC CCGATTACCC GCAGGGATGG CATACCGGCA TCCGGTCGGT GCTGGGCGAC ACCACGAAAG CGAACAATTG GGGAGCGATT GGTGCCTGGG CCTGGGGCAT GAGCCGTATT CTCGACTACC TACAAACCGA CCCGGCTATT GATGCCAAAC GGGTTATTTC CATCGGTCAC TCGCGAATTG GCAAAGCCGC CGTGTGGGCC GGGGCGCAGG ATGAACGATT TGCCGCCGTT ATTGCCAACG AATCGGGCGA AGGCGGGGCG GCTCTGGCCC GACGCTATTA CGGCGAAACC GTTGAGCGGC TTAACACCAG CTTCCCGCAC TGGTTTGCCC CTCGGTACAA AGCCTACAAC AAACGCGTAG CCGACTTACC CGTCGATCAG CACGAATTGC TGGCCCTTGT CGCTCCACGC CCGCTGTACG TGGCCAGTGC CGACGGCGAC CAATGGTCGG ACCCAAAAGG GGAGTTTCTG GGTGCGCTTC ATACCGAACC GGTTTACCAG CTTTACGGCA AAACGGGGCT GGGTACAACG GTCTTTCCGG CCGTTAATCA GCCAGTCGGC CAAACCGTTC GCTACCACGA CCGAACCGGC AAACATGATG TAACGGACTA CGATTGGGAG CAATACCTGC GCTTCGCCGA TGAATTAGTT CGCTAG
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Protein sequence | MTRFLLLAIL ILLSGPIANG QGPEGYNYDE AKVGTYTLPD LLVNTKGKPV KTKADWRNWR AELLKLFAEN VYGQTPAKSV KLRFQTTSVD ESALNGLAVR KQVSIFFVDY PQLPPIDVLI YFPKASTKPV PVFLGLNFCG NHCVTAEADI PLSTRWMMGE NSDVSNNNKA TEKARGMQVR RWPIDMIVKR GYALATAYYG DIEPDYPQGW HTGIRSVLGD TTKANNWGAI GAWAWGMSRI LDYLQTDPAI DAKRVISIGH SRIGKAAVWA GAQDERFAAV IANESGEGGA ALARRYYGET VERLNTSFPH WFAPRYKAYN KRVADLPVDQ HELLALVAPR PLYVASADGD QWSDPKGEFL GALHTEPVYQ LYGKTGLGTT VFPAVNQPVG QTVRYHDRTG KHDVTDYDWE QYLRFADELV R
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