Gene Slin_6546 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6546 
Symbol 
ID8730332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7943185 
End bp7944450 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content56% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003391302 
Protein GI284041372 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.769373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.950041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTCGAT TCCTGCTGTT AGCCATACTT ATCCTACTCT CCGGCCCTAT TGCCAACGGA 
CAAGGTCCCG AAGGCTATAA CTACGACGAA GCGAAAGTAG GTACCTATAC CCTGCCCGAT
CTGCTCGTAA ATACAAAGGG CAAACCTGTT AAGACGAAAG CCGACTGGCG CAACTGGCGG
GCAGAACTCT TGAAACTCTT TGCCGAAAAT GTGTACGGTC AAACCCCGGC TAAATCCGTT
AAGCTGCGTT TCCAGACAAC ATCGGTTGAC GAATCGGCCC TGAATGGGCT GGCTGTCCGT
AAACAGGTGT CCATCTTCTT TGTCGACTAT CCACAGTTAC CACCCATCGA CGTTCTGATT
TACTTCCCCA AAGCCAGTAC AAAACCCGTT CCGGTATTTT TGGGGCTGAA TTTTTGCGGT
AATCACTGCG TCACGGCAGA AGCAGATATT CCCCTGTCAA CCCGCTGGAT GATGGGTGAA
AACAGCGACG TTTCGAATAA CAACAAGGCC ACTGAGAAAG CGCGCGGTAT GCAGGTACGA
CGCTGGCCCA TCGACATGAT TGTCAAGCGC GGTTACGCCC TGGCCACCGC CTACTATGGC
GACATCGAAC CCGATTACCC GCAGGGATGG CATACCGGCA TCCGGTCGGT GCTGGGCGAC
ACCACGAAAG CGAACAATTG GGGAGCGATT GGTGCCTGGG CCTGGGGCAT GAGCCGTATT
CTCGACTACC TACAAACCGA CCCGGCTATT GATGCCAAAC GGGTTATTTC CATCGGTCAC
TCGCGAATTG GCAAAGCCGC CGTGTGGGCC GGGGCGCAGG ATGAACGATT TGCCGCCGTT
ATTGCCAACG AATCGGGCGA AGGCGGGGCG GCTCTGGCCC GACGCTATTA CGGCGAAACC
GTTGAGCGGC TTAACACCAG CTTCCCGCAC TGGTTTGCCC CTCGGTACAA AGCCTACAAC
AAACGCGTAG CCGACTTACC CGTCGATCAG CACGAATTGC TGGCCCTTGT CGCTCCACGC
CCGCTGTACG TGGCCAGTGC CGACGGCGAC CAATGGTCGG ACCCAAAAGG GGAGTTTCTG
GGTGCGCTTC ATACCGAACC GGTTTACCAG CTTTACGGCA AAACGGGGCT GGGTACAACG
GTCTTTCCGG CCGTTAATCA GCCAGTCGGC CAAACCGTTC GCTACCACGA CCGAACCGGC
AAACATGATG TAACGGACTA CGATTGGGAG CAATACCTGC GCTTCGCCGA TGAATTAGTT
CGCTAG
 
Protein sequence
MTRFLLLAIL ILLSGPIANG QGPEGYNYDE AKVGTYTLPD LLVNTKGKPV KTKADWRNWR 
AELLKLFAEN VYGQTPAKSV KLRFQTTSVD ESALNGLAVR KQVSIFFVDY PQLPPIDVLI
YFPKASTKPV PVFLGLNFCG NHCVTAEADI PLSTRWMMGE NSDVSNNNKA TEKARGMQVR
RWPIDMIVKR GYALATAYYG DIEPDYPQGW HTGIRSVLGD TTKANNWGAI GAWAWGMSRI
LDYLQTDPAI DAKRVISIGH SRIGKAAVWA GAQDERFAAV IANESGEGGA ALARRYYGET
VERLNTSFPH WFAPRYKAYN KRVADLPVDQ HELLALVAPR PLYVASADGD QWSDPKGEFL
GALHTEPVYQ LYGKTGLGTT VFPAVNQPVG QTVRYHDRTG KHDVTDYDWE QYLRFADELV
R