| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6542 |
|---|
| Symbol | |
|---|
| ID | 8730328 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 7939532 |
|---|
| End bp | 7940389 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | |
|---|
| Product | Prephenate dehydrogenase |
|---|
| Protein accession | YP_003391298 |
|---|
| Protein GI | 284041368 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTTGTCA GTATAATTGG AATAGGCTTA CTCGGTGGCT CGTTTGCCCT TGCCGTGCGC
GAGAAATACC CAAAAATGCG GTTCATCGGT GTCGACACAT CGCCCGTCAA TGGACAACTG
GCGATGGCAA AAGGCATTGT AGACGACGTA ATGTCCCTCC CCGAAGCCAT TGCTCAGAGC
ACACTGGTCG TGCTGGCAAC ACCCGTTAAT GTCATCATCG ACATGCTGCC CACCGTCCTC
GATCACTTGC CACCGGGGGC AACCGTCCTG GATCTGGGCT CTACCAAAGG GCTTATCTGC
GATGTGGCCG ACGCACATCC CAAACGGGCA CAGTTCGTAG CCGCTCACCC GATGGCAGGT
ACCGAAAACT CTGGGCCGGG GGCCGCCTTC AAAGAACTTT TGTTTGGTAA AAACCTCATT
ATCTGCGACC GGGAGAAGAG CCATCCCGAC AGTCTAACGT TAGCTGAAAG TCTGTTTCGG
GATATAGGTA TGAAGCTGTT CTATATGAGT CCGCAGGAGC ACGATTTGCA CCTCGCCTAC
GTATCCCACC TGAGCCACGT GAGCGCGTTT GCCCTTGGCC TAACGGTACT GGAGAAGGAA
AAAGACGAGC AGGCCATCTT CGACATGGCC AGTACCGGCT TCAGTTCTAC GGTGCGACTG
GCCAAAAGCT CGCCCGCTAT GTGGGCACCC ATCTTCGACC AGAACCGGCA AAACGTATCG
CAGGCCCTGG CCGATTACAT CGAGTTTTTG CAGCAGTTCA AGCAGATCAT CGACGATCAG
GACGTAATCA ACTCCCTCGA TTTCATGCAG CGGGCCAACG TAATTCGGCG GGTGCTGGAC
GGGATTGAGA AGCGGTAA
|
|---|
| Protein sequence | MVVSIIGIGL LGGSFALAVR EKYPKMRFIG VDTSPVNGQL AMAKGIVDDV MSLPEAIAQS
TLVVLATPVN VIIDMLPTVL DHLPPGATVL DLGSTKGLIC DVADAHPKRA QFVAAHPMAG
TENSGPGAAF KELLFGKNLI ICDREKSHPD SLTLAESLFR DIGMKLFYMS PQEHDLHLAY
VSHLSHVSAF ALGLTVLEKE KDEQAIFDMA STGFSSTVRL AKSSPAMWAP IFDQNRQNVS
QALADYIEFL QQFKQIIDDQ DVINSLDFMQ RANVIRRVLD GIEKR
|
|---|
| |