Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6533 |
Symbol | |
ID | 8730319 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7930275 |
End bp | 7932185 |
Gene Length | 1911 bp |
Protein Length | 636 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_003391289 |
Protein GI | 284041359 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.920736 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGA ATGAGTCACC TGAATTACTC GAGGCTGTAT TAGCCAATTC GCTTACAAAC ATATATGCGG CTAACGCAAT ACGACACCCC GAGTCCGGAC AAATCATCGA CTTCCAGATT GTACTGGCAA ATCCCACCTT TAGAGAACGA AGCGGCTATA CCGGCAAGCA GTTACGCAGC CAGAGCTTAT TAACGCTCTA TCCGGACTTA GCCCAATCAA CCCTATTAGG CCGGTTTATA GAGGTAGTCG AAACGCGTCG GGTTTTTCGG GGAGAGGAAT ATTTCCCAAA CTCCACCAGC TCGTTCTGGT ACGATTTATC CCTAAGTCCA TTTGGGGATG GTCTGGTGGT AAATTTTACA GACACGACTG CCAGATACCA GGAACAGCAA CTGGTCCAAC AGCAGGCCCA ACAACTTCAG GCTACCCTGG ATGGGTCTAT AAGTAGTATT CTGGCGATGA CCGCTATTCG TAATCCACAA GGACAGATCA TTGATTTTCG GATAGATAAA GCCAATCAGG CTGTCGAGCG TAGCTTGGGG AAGACACCCG CCGAACTGGA AGGCCATACG CTGTTGAGCG TGTATCCAGG TAATGTAGAA AGTGGCTTTT TCGCGCTTTA TGCCAAAGCC GCTGATACAG GGGAGTCACA ACAGGCAACG CTGCATTATA CGGACGTCAA TGGCTTCCAG GGCTGGTTTG AGGCTTCGGC TGTACGGTAC GCGCCTGATA AAATTGTGCT CACGTTCATG AACGTGACCG ATTATAAGCA AACCGAAGCA GTGATGCGAC AGCAGGCTGA TCTCTTACAA AGTGTGCTGG ATGCGACCAT GAATACGGTT GCTACCTATC AGGCTGTTCG CGATTCAATG AACCAAATTG TAGATTTTCG CTTCACAATG GCCAACCAGG CCGCCCTGGA GGTGGTTAAC CTAACAGCCG AAGAGTTGTA TACCAGAACC CTGCTGGAAG TGAGTCCTGA CCTGGCCAAT AGTGAGTTGT TCAATCAGTA CGTTACGGTG GTCCAAACCG GCCTACCGAT AACCTTTGAA CGTTACCGGC AGGGACGCTG GTTCTTGGCT AACGCCGTCC GCTTTGGCCA GGACGGGCTA CTGACATCCT CCCTTGATAT TACGTTGTTG AAGCAGGCCC AGCTTCAGGT TGAGCAACTC AACCAACAGC TTCAACAACG TAACGCCAGC CTTGACCAGT TTGCCGCCGT AGCCAGCCAC GACCTGCAGG AGCCGCTCCG TAAGATCAAG TCATTTGGCG ATATTCTCCT GGACCAGTAC GCGCCAAACC TGGGTGATGG CGTAGGCTTA CTGAGCCGGA TGCAATCGGC CGCTGACCGA ATGCAAACAC TCATCCGGTC TTTACTGGCG TATTCGCGTT TATCGCAGGA ACAGCCTGCT ACGTTTCAGC CTGTCGATCT AAATCGTGTA GTTACCGAAG TGATAAACGA CCTGGAAGTG GCCATTCAAG AGAAAGGGGC CGTTCTGGAA CTGAGCGACT TGCCGACGCT ACCCGGAGAT GCACTTCAGC TGCGACAGGT ATTTCAAAAT CTACTGAGCA ATGCGCTGAA GTTCACCAAA CCGGGCCGCT TACCCAGGGT CATACTAAGA GCCCAGCCAC TGAGGGACAA CGAACTTGCG GAGGAGGCTA GTCTGGCTCC TGGCTCTTAC TGGCAGATTA CGGTAGCTGA TAATGGCATT GGTTTTGGAG ATGAGTATCG TCAACAAATC TTCGGTGCTT TTGAACGGCT ACACAGTAAA AGTAGTGTGT ATGGAGGCAC GGGGATCGGC CTGGCCATTG TACGCAAGGT AATGGAAAAT CACCAGGGGG GCGTGACAGC CCACTCAAGC GAGGATGAAG GGGCTACCTT TACGCTCTTT TTACCAACTG AGGCCAGTTA G
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Protein sequence | MDANESPELL EAVLANSLTN IYAANAIRHP ESGQIIDFQI VLANPTFRER SGYTGKQLRS QSLLTLYPDL AQSTLLGRFI EVVETRRVFR GEEYFPNSTS SFWYDLSLSP FGDGLVVNFT DTTARYQEQQ LVQQQAQQLQ ATLDGSISSI LAMTAIRNPQ GQIIDFRIDK ANQAVERSLG KTPAELEGHT LLSVYPGNVE SGFFALYAKA ADTGESQQAT LHYTDVNGFQ GWFEASAVRY APDKIVLTFM NVTDYKQTEA VMRQQADLLQ SVLDATMNTV ATYQAVRDSM NQIVDFRFTM ANQAALEVVN LTAEELYTRT LLEVSPDLAN SELFNQYVTV VQTGLPITFE RYRQGRWFLA NAVRFGQDGL LTSSLDITLL KQAQLQVEQL NQQLQQRNAS LDQFAAVASH DLQEPLRKIK SFGDILLDQY APNLGDGVGL LSRMQSAADR MQTLIRSLLA YSRLSQEQPA TFQPVDLNRV VTEVINDLEV AIQEKGAVLE LSDLPTLPGD ALQLRQVFQN LLSNALKFTK PGRLPRVILR AQPLRDNELA EEASLAPGSY WQITVADNGI GFGDEYRQQI FGAFERLHSK SSVYGGTGIG LAIVRKVMEN HQGGVTAHSS EDEGATFTLF LPTEAS
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