Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6516 |
Symbol | |
ID | 8730302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | - |
Start bp | 7906841 |
End bp | 7907497 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | |
Product | protein of unknown function DUF305 |
Protein accession | YP_003391272 |
Protein GI | 284041342 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.14254 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACGT TCCAATCCAA CCCAGCCGTT TGGGTACTGG CGGCCCTTCT GTCCAGTGGT TCGCTGGTAG CCTGCGCCCA GGCCACAACG GGTGGCGCAA CAGCCAGTGC TTCAACAGCC AGCGACCCGG CCAAAACAAT GCTGCTGCAA CCGCTTCAGC AGATGGTAAC AAAAATGAAA AAGCTACAGG CAACCGGCGA CCCTGACTTC GACTATGCTT TTCAGGCTAA AGTCCATGCA CAGGGGGCAC AGGATTTGCT GAAACAGGAA ATTCAGAACG GGAAAGATTC ATCCCTGAAA CAAATGGCCC AGACATTGCT GACGGCCAGC GAAACCGAAT TATCGCAGCT GACCAGCACC CTCACCAGCC TTAAGCCAAC CCGGCCAAAT CAGGCATTTA CACAACAGCA AAGCCGAAAT GTTGAAGCAA TGAGCCTGAA GTTGCAGCAA ACGGGAGCCA GCGACAAGTT GACCAGTAAT CTGGATAATA ACTTCTCGAC GCTTCTGATA GACCAGCGCC AGGATGCCAT CGACCTGGCC AAAACGTACC TGCAATACGG TAAAAACAGC ACACTTAAGG CCTATGCCCA GCAGTTGATC GATAAATCGA CGCAGCAGAT GCAGCAAATG AAAACGATGG CCACCACACC TAAATAA
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Protein sequence | MKTFQSNPAV WVLAALLSSG SLVACAQATT GGATASASTA SDPAKTMLLQ PLQQMVTKMK KLQATGDPDF DYAFQAKVHA QGAQDLLKQE IQNGKDSSLK QMAQTLLTAS ETELSQLTST LTSLKPTRPN QAFTQQQSRN VEAMSLKLQQ TGASDKLTSN LDNNFSTLLI DQRQDAIDLA KTYLQYGKNS TLKAYAQQLI DKSTQQMQQM KTMATTPK
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