| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6502 |
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| Symbol | |
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| ID | 8730288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Spirosoma linguale DSM 74 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013730 |
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| Strand | - |
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| Start bp | 7888329 |
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| End bp | 7893404 |
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| Gene Length | 5076 bp |
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| Protein Length | 1691 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | protein of unknown function DUF490 |
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| Protein accession | YP_003391258 |
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| Protein GI | 284041328 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGAAAC TTTTTGTCCG AATTTTACTT GGTTTGCTTG CTATCGTGCT GTTGCTGGCA
GGATTTGTGG TCATTATTGC CACAACACCC TGGGGACAGC AATTGGTGAC CCGACAGGTA
AACTCCTATC TCGCCCAGAA ACTTCAATCG CCCTTTCATA TCGGGCGTAT CCGCTACTCC
ATTCCCGACT GGGTTGAACT GGAGGATGTT TTCTTTAAAA CCCCAAAAGG GGATACACTC
CTCAACGGAG GCCGTATGCG TGTGGACCTC GACATGTGGG GTCTCCTCAA TAACCGCGTT
GCTATTAACC AGATAGAGCT GGAACATATC CGCCTGAATA TCAGCCGAAC ATTGCCCGAC
CGTAACGACG GACCGCCAGC TTTCAACTTT CAGTACATTC TTAACGCGTT CGACACAGGC
GCGGCTCCGG AGCCTTCCGA TACAGTGTCG ACACCCATGG CCATTAACCT GACCGGTATT
GCCCTGAAAG ATGTACGGAT CAAGTATAAA GATGATGTTA CCGGGGCCGA TGTCAATGCC
TATATGGACA GCCTCCGGGC GGGCTTTAGC GCTACGGACG TCAACACGTC GAAATACCAT
TTGTCCAATG TAGCTGTCAA CGGGCTTGAC GTGTATACCC GATTGTACGA GGGGTTACCA
ACACCTCCCA GCGCACCCGC CAAACCCGGC GACACCCTCG ACCTGGCCCT TGGTAAGTGG
CAGATCAACC GGGCCAAGTG GGACATCCGC GTCGAAACCG CCGACTTCAA AACCAAAGGT
AGTGCCGAGC GTCTGGCCAT GGAATCGGAT TATTTTTACC TGGATGGCGA AAAAATAGGC
ATTAAGTCCC TCGATCTGGC TAACGCCGAT GTGGCAGCCA CCCTGACAAA GCCAACGAAA
AAAGCAGCCC CTACCCCACC CACGGCTACG TCGGCGGTTA CACCCGGCTG GCAGGCCCGG
TTAACAAACG TCCGGTTTGC CAACAACCGA ATTCGCTATG ATGATGAAAC GGCCCCGCGT
CAGAAAACAG GACTTGACTA TAGCCACCTC GATTTACAGA ATCTGGGCAT CGACGGCCGT
TTCCTTGTTT ATCAGGATTT AGGCAAACGG GGGCAGCGCA TCAGCGGGCA GTTGCGCAAC
GGCCGGTTCC GGGCCACCAG CGGCTTCGTT CTCCAGCAAC TCGAAGGCAA CCTTCTTTAT
ACCGACACCA CAACCACCAT TACCAAACTG TACTTGCAAA CGCCAACGAG TCTGCTACGG
GATCAACTGG TGCTTCGGTA TGATTCACTT GGGCAACTAA CAGACCCCCG TTTTGCGAAA
CGCGTGGCTG TTCGGGTAAA TCTACGCCAG AGCCGATTGT CTGTCGAGGA TGTCCTGCAA
CTGGCACCCT TCCTGGCCGA TACACCCCCC TTTGCAGGTA ATCGCGGGGG CGTTTTCCGG
GCTAATGCCC AGGCGACGGG TACACTGGCC GCATTGAACC TGCCCCGACT GGAGTTCGAT
ATGCTGTCCG GGACCAAAAT CAGGGCCAGC GGCCGGTTAA CCAACGTAAC GGACCCCAAC
CGCATTGGCG TCGACATGGC GATTCAGGAT GCGACCACAA ACCTGGCCGA CATCAATAAG
CTGGTCCCTA AAGGCACAAT CCCTTCGTCC ATTGCCTTGC CGCCTACCTT CAAACTGACT
GGTAAGCTGA AAGGCGCACT TAATGACCTT GTTCTGGATG CCAAATTGAA CACCGCCTGG
GGTACGGCCG GGTTCGATGG CCGACTCGCC GGGTTCGTTG CGGGGAAAAA CCAGACGTAC
AAAGGCACGC TTAATCTGAA CGATTTCGAT GCGGGTAAAT GGCTCAAACA ATCGGGCACG
GTCGGAAAAA TCACCGGCCG CGCTACGGTC GATGGGCGAG GTATTGACGT GAATACGCTA
ACCACCCGCT TCGATCTGGC TGTTCGGTCG GCCGAGCTGA GCGGATACCG ATACCAGAAT
CTGGACGCCA AAGGTCAACT CACGAAAGGA AATCTGACTC TTACGGGTGC CCTTAAAGAC
CCGAACGCTA ACGTAGCCCT CGACATCAAA GCCAGTCTGA AAGGTGACTT CCCAAGCGTT
ACGGGGCAGA CCGTGATCAA CGAGCTGAAC CTTCAGCAAC TGAAGCTTTA CAAAGATCCG
CTGTCCCTCA AGGGCAAGAT CAACCTTGAT ATGGCCTCCA CCGATCCGGC GAAACCCGTT
GGTACCGTTT CGGCGAGTGA CGCGGTCATC AGCCTGAACG GCAAAAGCTA CCCCGTCGAT
TCGCTCTATG CGAAACTGGG CGTCGATGGG AATACCAAAA ACGTAATAGC CCGTTTACCA
GGTGCTCAAC TCCGCCTGAA CGGGCAGTTC GAGTACGCTC AGTTATACGA CATCATTGCC
GGGGAGATCA GCCAGTATAT TGCCCTTCCC TCGCTGACGT ACAAACGTAT TCCGCCCCCT
CATGCCTTTA CGCTGGCCAT GAAAGCGTAT CAGAATCCGT TGTTTCAGGC CTTTGTCCCG
GCACTGACCC GAATGGATAC GGTTCGCTTT AACGCCTATC TGGACAACAC GCGTGACACG
ACTTTATCGG CCACGCTGCG CACCGGTGTC GTTGTATACG ATACCACCAC TTTGCAGGGA
AGCACGCTGG CTATTCGAGG GGCCAACAAT CAGTTAAAGG TTGACGGGCG CATCGATGGG
GTGCTTTACG ATGGCATAAA CATTCGCCAG ACAAACATAA ACGGCATTGC GGCCAATAAT
CGCTTCCGGT TTGCCGTCGT CAATAAAGAT TCTATCAATC AGGATTTGCA CGGCCTTTCC
GGAACACTTA GCGTGATAGA TTCGACCTAT CGGTTCCAGT TTGCGCCCAA TGGGCTGCTG
ACCAACTACC AACGCTGGCA AACCGACACA TCCGGCTTTG CCGAATATGG TAACAATGGT
GTATTGATCA ACCGCTTACG CATCGAAACA GAGCAGCAAT CGCTGGAGAT CAGCAGTACG
GAACAGTACG CCAATGCGCC TATCCGGGTT ACCGCCCGCG CCATTGAACT GGGCAATCTG
GCACGACTGG CCAATCAGGA CACCACGCTG GCCAGCGGGC AGCTTAACGG AACCGTGATC
GTGCGCGACT ACATGAGTCA GGATAGTAAA CTGGCCTTCA CCGGTTCCAT TTACGTCGAC
AGTCTGAAAG TCATGAGTAA ACCGATCGGC AACCTCACCG CCCGTTTCCG CAATGATACC
GACGGACGCA TCAGCGTGAA TACAACGCTG GCGGGGTCTT ATAATGATGC CACAGTTACC
GGCTATTACA ATCCCGAAAA TGCAAAACAG GCACTCGATC TGGCCATTAA GCTAAATCGT
CTGGATGCCC GAACTATCGA AGCCTTTAGC TTTGGCGAAC TGCGGCAGGC AAAAGGCCAA
CTCACCGGCG AATTCACCGT TGCGGGGGCG GTCGACAACC CACAAATGAG TGGAAGCGTC
GCCTTCGATT CGGTTGGCTT CAATATTAAG CAACTCAATG CGACCTACAA TATCGACAAG
GAAAAGCTGG CTTTCTCGGG GCAGACCATC ACGCTAAGCG GCTTCGACCT GCGCGATGAA
CAGGGACGGA CGCTGACAAC CGATGGCACC GTTGTGCTTA AAAATCTGCC CGATGCGGCC
TATAATCTCC GCGTACGGGC CGACCATTTC CAGGTGCTCA ACGCCAGCCG GAAGGATAAT
GATTACGCTT ATGGACAGGC CGCCGTTACC ACCGACCTAC GGATTAAAGG GGCAGGCACC
AATGCGTCGG TCAACGGAAC CGTCAGGCTG GAAGACGGCA GCAAAATATC CATGGTGCTG
CCCGATGAAG CGGCCAGTGC CAACGAGGCC AACGGCATTG TGACTTTCAT TAACCACAGC
GATTCGCTGG CGCTGGTTAA ATATCTGTAT AAGCCTAAAC AGGACACTCT GGGACCCCGG
CTGGCCTTTG AGCAATTAAG CAACTCCACC ATTTCGGTCG ATCTGGAAGC CGATGAAAAA
TCGGAACTGA CAATTGTGGT AGACGAACTG AACGGCGACT ACCTCCGCGC ACGCGGCAAC
GCCCGGCTCA ACGTTGGCGT TACGGCCTCG GGCGAAGTAA CCGTGCTGGG TCGCTACGAA
GTGACCGAGG GCGAATACTC GCTCACGTAT CAGGTGCTGA AACGGCAGTT TGAACTTCAG
AGAGGCGGCT ACATCAACTT CACCGGCGAT CCGCTCAAAG CCGACATCAA CATGACGGCC
GTTTATAAAG TATCAGCACC TCCGTCTGAC CTGATTGGCA GTGAGTCGAA CGCCATTGAT
GCGGCATCAC TCAAGCGCAA ACTTCCCTTT GAGGTCGACT TAACCATCAG CGACAACCTG
GCGGCTCCTA AACTCAATTT CGACATTCGG GCTCCGGAAA TTGAAAATAA CAGCGCAGGA
CAGGACAACT CCCTTGCCAC AAGCATTGAA ACAAAGCTCC GAACGCTCCG TCAGGACCCG
GCCCAGATCA ACAAACAGGT ATTTGCCCTC TTGATCTTAA ACCGATTCTT ACCGGAGAAC
TCAGCGGATT TCTTCTCGGG CTCGGACAAT GGCGGGCTGA ACACGCAGGC CGAGAACATC
GCCCGAAGCA GTGTCAGCAA ACTTATTTCC GATCAGTTGG GGCGGTTGGC TTCGGGTGTG
CTGAAAGGCT TCGATGTTGA CTTCAATTTA CTCTCGCAGG CAGGTAGCGC CAATACCGGC
GGTACCACAA ATGGCAGCCG AACCGACTTG AACGTTGGCC TGTCGAAGAG CTTCCTGGCA
GGTCGGGTAA CCGTTTCGGT CGGTAAAAAC TTTGTTCTCG ACAACTCGGC CAATGCGGCC
GTTCCCAGCC AGAATCAGGT TTTCGACAAC CTATCAGTCA ATTACAACGT TACCCGCGAT
GGTCGCTATA TGCTGCGGGC GTACCGCCGT AATGACTACC AGGCTGTGCT GGATGGCTAT
ATTATTGAAA CAGGGGTTGG GTTTATTATT TCGATGGATT TCAACACACT GTCCGAAATC
TTTCGTCGGT CAACGCCTGC CCCCGCGATG AATTAA
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| Protein sequence | MSKLFVRILL GLLAIVLLLA GFVVIIATTP WGQQLVTRQV NSYLAQKLQS PFHIGRIRYS
IPDWVELEDV FFKTPKGDTL LNGGRMRVDL DMWGLLNNRV AINQIELEHI RLNISRTLPD
RNDGPPAFNF QYILNAFDTG AAPEPSDTVS TPMAINLTGI ALKDVRIKYK DDVTGADVNA
YMDSLRAGFS ATDVNTSKYH LSNVAVNGLD VYTRLYEGLP TPPSAPAKPG DTLDLALGKW
QINRAKWDIR VETADFKTKG SAERLAMESD YFYLDGEKIG IKSLDLANAD VAATLTKPTK
KAAPTPPTAT SAVTPGWQAR LTNVRFANNR IRYDDETAPR QKTGLDYSHL DLQNLGIDGR
FLVYQDLGKR GQRISGQLRN GRFRATSGFV LQQLEGNLLY TDTTTTITKL YLQTPTSLLR
DQLVLRYDSL GQLTDPRFAK RVAVRVNLRQ SRLSVEDVLQ LAPFLADTPP FAGNRGGVFR
ANAQATGTLA ALNLPRLEFD MLSGTKIRAS GRLTNVTDPN RIGVDMAIQD ATTNLADINK
LVPKGTIPSS IALPPTFKLT GKLKGALNDL VLDAKLNTAW GTAGFDGRLA GFVAGKNQTY
KGTLNLNDFD AGKWLKQSGT VGKITGRATV DGRGIDVNTL TTRFDLAVRS AELSGYRYQN
LDAKGQLTKG NLTLTGALKD PNANVALDIK ASLKGDFPSV TGQTVINELN LQQLKLYKDP
LSLKGKINLD MASTDPAKPV GTVSASDAVI SLNGKSYPVD SLYAKLGVDG NTKNVIARLP
GAQLRLNGQF EYAQLYDIIA GEISQYIALP SLTYKRIPPP HAFTLAMKAY QNPLFQAFVP
ALTRMDTVRF NAYLDNTRDT TLSATLRTGV VVYDTTTLQG STLAIRGANN QLKVDGRIDG
VLYDGINIRQ TNINGIAANN RFRFAVVNKD SINQDLHGLS GTLSVIDSTY RFQFAPNGLL
TNYQRWQTDT SGFAEYGNNG VLINRLRIET EQQSLEISST EQYANAPIRV TARAIELGNL
ARLANQDTTL ASGQLNGTVI VRDYMSQDSK LAFTGSIYVD SLKVMSKPIG NLTARFRNDT
DGRISVNTTL AGSYNDATVT GYYNPENAKQ ALDLAIKLNR LDARTIEAFS FGELRQAKGQ
LTGEFTVAGA VDNPQMSGSV AFDSVGFNIK QLNATYNIDK EKLAFSGQTI TLSGFDLRDE
QGRTLTTDGT VVLKNLPDAA YNLRVRADHF QVLNASRKDN DYAYGQAAVT TDLRIKGAGT
NASVNGTVRL EDGSKISMVL PDEAASANEA NGIVTFINHS DSLALVKYLY KPKQDTLGPR
LAFEQLSNST ISVDLEADEK SELTIVVDEL NGDYLRARGN ARLNVGVTAS GEVTVLGRYE
VTEGEYSLTY QVLKRQFELQ RGGYINFTGD PLKADINMTA VYKVSAPPSD LIGSESNAID
AASLKRKLPF EVDLTISDNL AAPKLNFDIR APEIENNSAG QDNSLATSIE TKLRTLRQDP
AQINKQVFAL LILNRFLPEN SADFFSGSDN GGLNTQAENI ARSSVSKLIS DQLGRLASGV
LKGFDVDFNL LSQAGSANTG GTTNGSRTDL NVGLSKSFLA GRVTVSVGKN FVLDNSANAA
VPSQNQVFDN LSVNYNVTRD GRYMLRAYRR NDYQAVLDGY IIETGVGFII SMDFNTLSEI
FRRSTPAPAM N
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