| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Slin_6490 |
|---|
| Symbol | |
|---|
| ID | 8730275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Spirosoma linguale DSM 74 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013730 |
|---|
| Strand | - |
|---|
| Start bp | 7872206 |
|---|
| End bp | 7874116 |
|---|
| Gene Length | 1911 bp |
|---|
| Protein Length | 636 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | |
|---|
| Product | ATP-binding region ATPase domain protein |
|---|
| Protein accession | YP_003391246 |
|---|
| Protein GI | 284041316 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACTGGA TAGCACGCTT CACAGTATTA CTAGTATTAG CTAGTACAAC ATCGCATGTA
TATGGAGGCA AGCCTATACA GTTGTCGTCA AAATCTACGT ACTGCCCCAT TGGACGGCAG
GCCGATTATC TAGTTGATAC AAATGGACGA ATTACCTTTC AGTATGCCTT GATACTTGCA
AAGAAAAATC ACTTCAAACC ATTGCAGCAA GATGTAGCGA ATATGGTAAA AACTGATGCG
GGCTACTGGT TCCGGTTCTC AATTTCTGTT CAATCCCAGC CAGTTGATAC TGATTATTTA
TTTGAAGTTG GTTTTGGTAA TATCAAGCAT ATTAGTCTGT ATTTGATTGA TCAGCATGGA
AATCTAACTA CTAGTCAGGC TGGAGATCAG TTGGAGCGGG CCAGTCGACC TGTGTCTTTT
CATACATACG TATTCCCACT TCCGGTAAAG CCAGGCAATA CCTACAACGT TTTCGTTCAT
ATTGATAACC AGAATGTGCA TAGCTTCTTT CCAATGGCTA TCTGGGAGCA AAAGGCATTT
ATGACGCATT CTCAGAGGTC AGCCCTGCTC TGGGGCTTTT ACTGGGGATT TTTATGTTTG
ATGTTTCTTT ATCATATCGT TATCTGGATT TTTACTCGAA CACAAGGGTA CATGTATCTG
GCCGCGTATC TGGCCGCGTA TATGTTCTAT GAAGCTGCGC GCGGCAGTAA CATTGGTGCC
CGATATTTAT GGCCCCAATC TTTCTGGCTA ATGGAGCATA GTTTGTCCAT ATTTTCTGTG
GGTGTTATTA TCACATTTAC TCTTTTCTAT AGTAAGGTAC TCAATCTGCA AAAATCGTTG
CCTGTTTTAC GGTATATTCT CCTGATTATG TGTAGCATCA GCGTCATATT ATTAGTGAGC
AGCCTCAGCA CGCCAATAAA CACCTCTAGT CAGTTTATTG CCATATTGAG TTCATTCCCG
TTAGTTCTAA TCATGTTTCT GGCTGGGCTA ATTACTTGGT TTCGCGGCCT GAAAGCCGCT
CGATTTTACG TTGTTGCATC AATCTGTTAC GCTATTGGTT TTACTGTCTT TGTACTAAAC
AGAACCAACG TATTACCCGG AATGAATTTC CTGATTCATT ATTCACAAAA TATTGGTTCA
CTGCTGGAAT TTGTATTTAT GTCGATTGGT CTAGCCGATT TTGTCAGGCA CGAGCGTAGG
TCCCGACAAT TGGAATCCCA TCAGCGAGAA CAATTAGAAA AGCAGATGCT CAAAGAACGT
CTGCGTCAAA AAACAGACTT GGAAGAAGCG TTAATTCATG GGCAAATACA GGAACGCCAA
CGTGTGGCTA ATGAACTCCA CGACCAGTTA GGCAGTGTGT TGTTCGGTTT GCGTATTGGA
TTCGATAAAT TAAAAGTTGA CACGAAAACA ACAGATGGCC AGGAGGTGGT TTCTTCACTT
CTGCAAACTG TTCAGAGTGC TTACGAAGAA GTTCGACTCA TTTCTCATAA TTTGTGGCCC
AGCGAACTCG AAGAGCGTGG TTTTGGTCAT ACGCTGAACC GTCTAATCGG CACCCTGAAT
AGTCAGGCAA AAACCCATTT TGTGTTGCAG TTAAGCGGTC AGGAAGAAGA ACTAGGCCGT
ATCGCTAAAT TCCACCTGTA TTGTATTTGC CTCGAATTAA TAAATAATAT TTTGAAGCAC
GCACAGGCAG ATGAGGCCAC GATTCGTTTT ACAACTGACC TTAATAGTGC AACGCTTCGT
CTAAGCATAC GTGACGATGG GGTTGGTATG GACAATAGTA TGTCAGCTAC AGGCCGGGGT
TTGCAAAGCA TTCATGAGCG AGTCAAATTA CTGCAAGGAT CGATTCGATT TACGTCACTG
CCCGAAGGAG TTGGTACATG GGTACAAATT TCGATCCCAT GTGTTCTATA A
|
|---|
| Protein sequence | MNWIARFTVL LVLASTTSHV YGGKPIQLSS KSTYCPIGRQ ADYLVDTNGR ITFQYALILA
KKNHFKPLQQ DVANMVKTDA GYWFRFSISV QSQPVDTDYL FEVGFGNIKH ISLYLIDQHG
NLTTSQAGDQ LERASRPVSF HTYVFPLPVK PGNTYNVFVH IDNQNVHSFF PMAIWEQKAF
MTHSQRSALL WGFYWGFLCL MFLYHIVIWI FTRTQGYMYL AAYLAAYMFY EAARGSNIGA
RYLWPQSFWL MEHSLSIFSV GVIITFTLFY SKVLNLQKSL PVLRYILLIM CSISVILLVS
SLSTPINTSS QFIAILSSFP LVLIMFLAGL ITWFRGLKAA RFYVVASICY AIGFTVFVLN
RTNVLPGMNF LIHYSQNIGS LLEFVFMSIG LADFVRHERR SRQLESHQRE QLEKQMLKER
LRQKTDLEEA LIHGQIQERQ RVANELHDQL GSVLFGLRIG FDKLKVDTKT TDGQEVVSSL
LQTVQSAYEE VRLISHNLWP SELEERGFGH TLNRLIGTLN SQAKTHFVLQ LSGQEEELGR
IAKFHLYCIC LELINNILKH AQADEATIRF TTDLNSATLR LSIRDDGVGM DNSMSATGRG
LQSIHERVKL LQGSIRFTSL PEGVGTWVQI SIPCVL
|
|---|
| |