Gene Slin_6469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6469 
Symbol 
ID8730254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7840814 
End bp7842535 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content46% 
IMG OID 
Productpeptidase M48 Ste24p 
Protein accessionYP_003391225 
Protein GI284041295 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATGT TTAACTACAT TTTTTTGCTG GCCTTTTTGC CGCTAACCTT ATTCGCTCAG 
GCACCGGCTA AGCCTGCAGC CGCACCAGGC TATGACGTAC AAATCGATGG CGTGCCTATG
GATATGAAAG AGTTAAAAGG CACCATTGTC GAATTTAAAC CTCCTTATAA GTATATGCAG
GTATTGGTGG AGGGCGATGA AGATGGGCGG TTTAGTAACG TGCTGGTGAC CGACAGTACG
TGGTTCCCCA GGCGGCATGT ACAGTATTCA AAAACTGTAC GCAAACCGAC GAAGCCAGAA
AACCTTCAAA AATCATCGCA ATACCGACCT GGTATGGAGG TAAAGTTACA TGTCAGCCAC
TATCAGCGAT CCTTACGGAA TGTTGCCAAA GAAATTTATC TGGATGAAGA TTACTATGGA
AAGGCTAAAG TAAGCGGCAT TTTCGAATTC TACGATGGCA ATAAAGCTGT GATTGACGGA
CAAACGGTCA TCATGGAGCC GAATGCTGTA ATTAAAGGCA CCGATGAGTG GAAAAATATG
ACATTTAAGT CATTTAGCGA GATACAGCCC GGCTCTGAAA TAACCGTGAA AGGTCGGCGC
GATACAACCG GTATTGTGTA TATCAAAGAA GGAACAAACT GCCCTATTAA AATTGGTAAA
GATGATCTGC TGATGCGACG GGCCGTTAAT AAAGCACTCT GGGTCAATAA AAATGTGCTG
CAGATTGGTA AAGATGTTCG CTATGACTTC GTCATGGATC GAGCCATGTT TGCTTACGTC
AATGACATTG GCCAAAAGCT TATTCCTTCC TACCTGAAGA CGCTGAAAGA CGACCACCCA
GACTTTATTA ACTTCAAATT TTACCTGGTT CACGACAATT CATTTAATGC GTCGGCCTAT
CCAAATGGGG CTGTCATCAT CCATACAGGT CTGCTAAAAC AACTGGATAA TGAAGCACAA
CTGGCGGCCA TTTTAGGCCA TGAGATTGCC CATGTAACCC AACGGCATCA TACCCATAGT
TACAGTAAAG GTAAAGACTG GCAGGCATTG GCTGATTTCG GTAGCCTTGT GGGCGGGTAT
GCATACGGTA CCGATTTGCC AGGACAGATT GCGCAGTCTG TAAAAGATAT GTATCACAGC
AGCTATAATC GAACTCAGGA AACCCAGGCC GACCGAATCG GATTGCAATA CATGTATAAT
GCCGGTTATG ATCCGCGCGA AGCAGCCATT ATTTGGGGAA AACTAGCTCT GGAAGACAAA
CACGATGAGG AAAGCCCCGA AGAAGCCAAA GCTTTAGCGG CCTTAAACGC CAATAGCGTA
GCCGTTACCC GGCAGGATAA TACAGCGCGG GCGACTCGGC TGGCGCTTTT CGGGAGCGCG
CTGAATTATT CCAGTTCGGC TATGGTCATG AGTTTGGCGA AAAATGTAGC CAGTAAAGCT
GGTGAGTCAG TTTATGCCTC TCACCCACGC TCAAGGGACC GATTCAACCA TGTCAACTTT
CTGCTTTCAA CGGCCTACGC CAGTTATAGC TTCGACAAAA CAGTAGCTGA AACACCTGAA
TTTACAAAAT TCAAGAACCA GTTAAACTCG TCTGGAACTT CGACTGCCCC GAATATAACA
TCGACAGCTA CCAGCCAAAC TCCACCTAAA AGTCTTAAGC CAGGTCAAAC CAGACCTGGC
GGCAAAACCC TCGTAGCACC TAAAGCATCT AAGAAAAAAT GA
 
Protein sequence
MRMFNYIFLL AFLPLTLFAQ APAKPAAAPG YDVQIDGVPM DMKELKGTIV EFKPPYKYMQ 
VLVEGDEDGR FSNVLVTDST WFPRRHVQYS KTVRKPTKPE NLQKSSQYRP GMEVKLHVSH
YQRSLRNVAK EIYLDEDYYG KAKVSGIFEF YDGNKAVIDG QTVIMEPNAV IKGTDEWKNM
TFKSFSEIQP GSEITVKGRR DTTGIVYIKE GTNCPIKIGK DDLLMRRAVN KALWVNKNVL
QIGKDVRYDF VMDRAMFAYV NDIGQKLIPS YLKTLKDDHP DFINFKFYLV HDNSFNASAY
PNGAVIIHTG LLKQLDNEAQ LAAILGHEIA HVTQRHHTHS YSKGKDWQAL ADFGSLVGGY
AYGTDLPGQI AQSVKDMYHS SYNRTQETQA DRIGLQYMYN AGYDPREAAI IWGKLALEDK
HDEESPEEAK ALAALNANSV AVTRQDNTAR ATRLALFGSA LNYSSSAMVM SLAKNVASKA
GESVYASHPR SRDRFNHVNF LLSTAYASYS FDKTVAETPE FTKFKNQLNS SGTSTAPNIT
STATSQTPPK SLKPGQTRPG GKTLVAPKAS KKK