Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Slin_6443 |
Symbol | |
ID | 8730227 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Spirosoma linguale DSM 74 |
Kingdom | Bacteria |
Replicon accession | NC_013730 |
Strand | + |
Start bp | 7813260 |
End bp | 7813868 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003391199 |
Protein GI | 284041269 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTGTCA GCGAACGGAA AGCACGCGAG AAAGAAGAAC TACGGAACCT GATTCTGGAA GGAGCCATGA AGCTCTTTGC CGAAAAGGGC GTAGCTAACG TGACGATCCG GAACATTGCC GATGCCGTGG AGTACAGCGT CGGGACGGTG TATGTCTATT TCAAAGATAA AAACGCTATT CTGCACGCCC TTCACACCAA GGGATTTCTG GAGCTGCGCG ACCGGTTTCT GGTCCTGCTG AACGTGGCAA ATCCGATGGA ACGGCTAAAA GCTGCGGGTA AAGTGTATAT TCAATTTGCT CAGGAGCAGT CTGATATGTA CGATCTGATG TTCAATACAC AGGCTCCGAT GGATTTCGTA AAAGAAGGCG ATGGTGATGT GTGGAACGAA GGGAAAGCAA CCTTTGGCTT CCTGCGGACC ATGATTCAGG ACTGTCAGGC AGCTGGGCAT TTTGACGGGC ATGACCCCGA AGCTCTATCC TTTCTGATCT GGAGTATCGT GCATGGGATG TGTAGCCTGA GAATCTCGTG CCGTACCGAC GTGGTTAATC TCGAACAGCC CACCACGCAG GGTTACGCCG AATTTTTGCG AATGCTGGAT AAGTTTTAA
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Protein sequence | MGVSERKARE KEELRNLILE GAMKLFAEKG VANVTIRNIA DAVEYSVGTV YVYFKDKNAI LHALHTKGFL ELRDRFLVLL NVANPMERLK AAGKVYIQFA QEQSDMYDLM FNTQAPMDFV KEGDGDVWNE GKATFGFLRT MIQDCQAAGH FDGHDPEALS FLIWSIVHGM CSLRISCRTD VVNLEQPTTQ GYAEFLRMLD KF
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