Gene Slin_6438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSlin_6438 
Symbol 
ID8730222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSpirosoma linguale DSM 74 
KingdomBacteria 
Replicon accessionNC_013730 
Strand
Start bp7807593 
End bp7809047 
Gene Length1455 bp 
Protein Length484 aa 
Translation table11 
GC content49% 
IMG OID 
Productiron-dependent peroxidase-like protein 
Protein accessionYP_003391194 
Protein GI284041264 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.957301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGTTT TACTAGATCC CCAGTCTTTA GCCATTCGCC CCCTGCTCGA CGGTATTCAG 
GGCAACATTC TGAAATCGCA TGGCCGCCAT CATACGGCCA ATATCTTTAT TCGCTGTTAT
GACGGACAGC AAACCAGTGC TAAAGCCTGG CTCAAAAGTC TGGTCGAGGG TGAAGACGCT
ATCATACAGT CTGGGTACGC CCAATTGCGA ACGAACGTAC TTTGGAAAGA AGAGCGAGTT
GATACGGGGC TCTTCGCCTG TATCCACATC AGTGCTGCTG GCTATGACTA CCTGTTTGGA
TCAAACAAAA GGGCCCTTTT TGATGATGTT GCCTTTCAGA ACGGTATGAA GCAATCGCCC
CTTAATGACC CAGCCCCTGA AACGTGGGAC AGCGGGCTAG CCGTAGATAA TCACTTTATG
TTGCTGCTGG CCCATGCTAA TCCGGAGTCT CTCACAGAGT CTATCCATAC TATTGTTCAG
CCAATCGAAT CGTTTGCCGA GATCACGGCC CTTGAAAAAG GAGATGCGCT GCTCAACAAA
GAAAAAGCTG GCATAGAACA CTTTGGCTAT GTAGACGGTA TTTCGCAGCC TTTATTCTTT
ACAGATGAAT GGGAGACATA TGTAAAAAAT AACAACATCA AGGATGAAGC CGACATCAGA
TTCGACCCTC GTGCGGCTAA AGAACTGGTA TTAGTGCAGG ACCCATTCCT ACCCAACGAC
TCTAATGCAT TGGGGAGCTA CTTCGTATTC CGAAAACTGG AGCAAAATGT AAAAGGATTC
AAATTGGCTG AGGAAAATTT AGCAGCTGAG CTAGGCCTGG AAGGTGAAGA CAAAGAAAGA
GCCGGAGCTA TGCTGGTCGG CAGATTTGAG GATGGCACCC CGGTTGAGCT GAGTGATGAA
GCCGGTTTGA TTAATAGCGC TGTGCTGAAT AACTTTGACT ACAACCTTAT CGAGGGCTCC
AAATGCCCCT TCCACGGCCA TATTCGTAAA ACAAACCCCC GCTCCAGTAT GCCCGCTGGC
AGTGGCGGGA TGGAGGAGGC TAAAAAGCAT AGTATGGCCC GGCGTGGCAT ACCTTTCGGC
AAGCGCACTG ACGACCCGAA CGACGGACAT ATTTCCAACA AACCCGAAGG GTGTGTGGGA
CTGCTGTTCA TGAGCTATCA GAATAGCATC ACCACGCAAT TTGAGCTCAT TCAGAGCCAG
TGGGCCAATA ATCAACGGTT TCCGCACACG ACCTCCGGCC ACATTAACCA CGACGGCATC
GATTCAATAA TTGGCCAGGC ATTGGCCCAA AGTCCAGACG AACAGAATCC GCGAGGAGAC
GGAGCATACG CAGCTGAATG GGGGAACTCA TTAACACAGC AACGTGCTTC ATTCGCTCAA
TTTGTCCATC TAAAAGGGGG TGAGTACTTC TTTGCGCCCA GCATGAGTTT TCTGAAACGT
ATCGACAAAC TCTAG
 
Protein sequence
MTVLLDPQSL AIRPLLDGIQ GNILKSHGRH HTANIFIRCY DGQQTSAKAW LKSLVEGEDA 
IIQSGYAQLR TNVLWKEERV DTGLFACIHI SAAGYDYLFG SNKRALFDDV AFQNGMKQSP
LNDPAPETWD SGLAVDNHFM LLLAHANPES LTESIHTIVQ PIESFAEITA LEKGDALLNK
EKAGIEHFGY VDGISQPLFF TDEWETYVKN NNIKDEADIR FDPRAAKELV LVQDPFLPND
SNALGSYFVF RKLEQNVKGF KLAEENLAAE LGLEGEDKER AGAMLVGRFE DGTPVELSDE
AGLINSAVLN NFDYNLIEGS KCPFHGHIRK TNPRSSMPAG SGGMEEAKKH SMARRGIPFG
KRTDDPNDGH ISNKPEGCVG LLFMSYQNSI TTQFELIQSQ WANNQRFPHT TSGHINHDGI
DSIIGQALAQ SPDEQNPRGD GAYAAEWGNS LTQQRASFAQ FVHLKGGEYF FAPSMSFLKR
IDKL